# An R package for BiomeBGC-MuSo ecosystem modelling

## Documentation for package ‘RBBGCMuso’ version 0.7.1

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

calibMuso | calibMuso
calibrateMuso | calibrateMuso
changemulline | changemulline
checkFileSystem | checkFileSystem
checkMeteoBGC | checkMeteoBGC
cleanupMuso | cleanupMuso
compareCalibratedWithOriginal | compareCalibratedWithOriginal
compareMuso | compareMuso
copyMusoExampleTo | copyMusoExampleTo
corrigMuso | corrigMuso
createSoilFile | createSoilFile
fextension | fextension
flatMuso | flatMuso
getAnnualOutputList | getAnnualOutputList
getConstMatrix | getConstMatrix
getDailyOutputList | getDailyOutputList
getFilePath | getFilePath
getFilesFromIni | getFilesFromIni
getSoilDataFull | getSoilDataFull
getyearlycum | getyearlycum
getyearlymax | getyearlymax
multiSiteCalib | multiSiteCalib
multiSiteThread | multiSiteThread
musoDate | musoDate
musoGlue | musoGlue
musoMapping | musoMapping
musoMappingFind | musoMappingFind
musoMonte | musoMonte
musoQuickEffect | musoQuickEffect
musoRand | musoRand
musoSensi | musoSensi
normalMuso | normalMuso
optiMuso | optiMuso
paramSweep | paramSweep
plotMuso | plot the Biome-BGCMuSo output
plotMusoWithData | plot the Biome-BGCMuSo model output with observation data
randEpc | randEpc
readObservedData | readMeasuredMuso
rungetMuso | rungetMuso
runMuso | runMuso
saveAllMusoPlots | saveAllMusoPlots
setupMuso | setupMuso
spinupMuso | Runs the Biome-BGCMuSo model in spinup phase (execution of normal phase is possible with normalMuso) with debugging features.
supportedMuso | supportedMuso
updateMusoMapping | updateMusoMapping