From 2b6c70a40439f2981dab84e3554d6d6e19d033ab Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Zolt=C3=A1n=20BARCZA?= Date: Thu, 6 Feb 2020 09:19:22 +0100 Subject: [PATCH] Delete c3grass_muso6.epc --- RBBGCMuso/inst/examples/hhs/c3grass_muso6.epc | 138 ------------------ 1 file changed, 138 deletions(-) delete mode 100644 RBBGCMuso/inst/examples/hhs/c3grass_muso6.epc diff --git a/RBBGCMuso/inst/examples/hhs/c3grass_muso6.epc b/RBBGCMuso/inst/examples/hhs/c3grass_muso6.epc deleted file mode 100644 index 8384e25..0000000 --- a/RBBGCMuso/inst/examples/hhs/c3grass_muso6.epc +++ /dev/null @@ -1,138 +0,0 @@ -ECOPHYS FILE - C3 grass muso6 ----------------------------------------------------------------------------------------- -FLAGS -0 (flag) biome type flag (1 = WOODY 0 = NON-WOODY) -0 (flag) woody type flag (1 = EVERGREEN 0 = DECIDUOUS) -1 (flag) photosyn. type flag (1 = C3 PSN 0 = C4 PSN) ----------------------------------------------------------------------------------------- -PLANT FUNCTIONING PARAMETERS -0 (yday) yearday to start new growth (when phenology flag = 0) -364 (yday) yearday to end litterfall (when phenology flag = 0) -1.0 (prop.) transfer growth period as fraction of growing season (when transferGDD_flag = 0) -1.0 (prop.) litterfall as fraction of growing season (when transferGDD_flag = 0) -0 (Celsius) base temperature --9999 (Celsius) minimum temperature for growth displayed on current day (-9999: no T-dependence) --9999 (Celsius) optimal1 temperature for growth displayed on current day (-9999: no T-dependence) --9999 (Celsius) optimal2 temperature for growth displayed on current day (-9999: no T-dependence) --9999 (Celsius) maxmimum temperature for growth displayed on current day (-9999: no T-dependence) --9999 (Celsius) minimum temperature for carbon assimilation on current day (-9999: no T-dependence) --9999 (Celsius) optimal1 temperature for carbon assimilation on current day (-9999: no T-dependence) --9999 (Celsius) optimal2 temperature for carbon assimilation on current day (-9999: no T-dependence) --9999 (Celsius) maxmimum temperature for carbon assimilation on current day (-9999: no T-dependence) -1.0 (1/yr) annual leaf and fine root turnover fraction -0.00 (1/yr) annual live wood turnover fraction -0.0 (1/yr) annual fire mortality fraction -0.01 (1/vegper) whole-plant mortality fraction in vegetation period -36.6 (kgC/kgN) C:N of leaves -45.0 (kgC/kgN) C:N of leaf litter, after retranslocation -50.0 (kgC/kgN) C:N of fine roots -36.6 *(kgC/kgN) C:N of fruit -36.6 (kgC/kgN) C:N of soft stem -0.0 *(kgC/kgN) C:N of live wood -0.0 *(kgC/kgN) C:N of dead wood -0.4 (kgC/kgDM) dry matter carbon content of leaves -0.4 (kgC/kgDM) dry matter carbon content of leaf litter -0.4 (kgC/kgDM) dry matter carbon content of fine roots -0.4 *(kgC/kgDM) dry matter carbon content of fruit -0.4 (kgC/kgDM) dry matter carbon content of soft stem -0.4 *(kgC/kgDM) dry matter carbon content of live wood -0.4 *(kgC/kgDM) dry matter carbon content of dead wood -0.68 (DIM) leaf litter labile proportion -0.23 (DIM) leaf litter cellulose proportion -0.34 (DIM) fine root labile proportion -0.44 (DIM) fine root cellulose proportion -0.68 *(DIM) fruit litter labile proportion -0.23 *(DIM) fruit litter cellulose proportion -0.68 (DIM) soft stem litter labile proportion -0.23 (DIM) soft stem litter cellulose proportion -0.00 *(DIM) dead wood cellulose proportion -0.01 (1/LAI/d) canopy water interception coefficient -0.7 (DIM) canopy light extinction coefficient -0.6 (g/MJ) potential radiation use efficiency -0.781 (DIM) radiation parameter1 (Jiang et al.2015) --13.596 (DIM) radiation parameter2 (Jiang et al.2015) -2.0 (DIM) all-sided to projected leaf area ratio -2.0 (DIM) ratio of shaded SLA:sunlit SLA -0.3 (DIM) fraction of leaf N in Rubisco -0.03 (DIM) fraction of leaf N in PEP Carboxylase -0.002 (m/s) maximum stomatal conductance (projected area basis) -0.00006 (m/s) cuticular conductance (projected area basis) -0.039 (m/s) boundary layer conductance (projected area basis) -1.0 (m) maximum height of plant -0.8 (kgC) stem weight corresponding to maximum height -0.5 (dimless) plant height function shape parameter (slope) -1.0 (m) maximum depth of rooting zone -2.67 (DIM) root distribution parameter -0.4 (kgC) root weight corresponding to max root depth -0.5 (dimless) root depth function shape parameter (slope) -1000 (m/kg) root weight to rooth length conversion factor -0.3 (prop.) growth resp per unit of C grown -0.195 (kgC/kgN/d) maintenance respiration in kgC/day per kg of tissue N -0.1 (DIM) theoretical maximum prop. of non-structural and structural carbohydrates -0.24 (DIM) prop. of non-structural carbohydrates available for maintanance respiration -0.0048 (kgN/m2/yr) symbiotic+asymbiotic fixation of N -0 (day) time delay for temperature in photosynthesis acclimation ----------------------------------------------------------------------------------------- -CROP SPECIFIC PARAMETERS -0 (DIM) number of phenophase of germination (from 1 to 7; 0: NO specific) -0 (DIM) number of phenophase of emergence (from 1 to 7; 0: NO specific) -0.5 (prop.) critical VWCratio (prop. to FC-WP) in germination -0 (DIM) number of phenophase of photoperiodic slowing effect (from 1 to 7; 0: NO effect) -20 (hour) critical photoslow daylength -0.005 (DIM) slope of relative photoslow development rate -0 (DIM) number of phenophase of vernalization (from 1 to 7; 0: NO effect) -0 (Celsius) critical vernalization temperature 1 -5 (Celsius) critical vernalization temperature 2 -8 (Celsius) critical vernalization temperature 3 -15 (Celsius) critical vernalization temperature 4 -0.04 (DIM) slope of relative vernalization development rate -50 (n) required vernalization days (in vernalization development rate) -0 (DIM) number of flowering phenophase (from 1 to 7;0: NO effect) -35 (Celsius) critical flowering heat stress temperature 1 -40 (Celsius) critical flowering heat stress temperature 2 -0.2 (prop.) theoretical maximum of flowering thermal stress mortality parameter ----------------------------------------------------------------------------------------- -STRESS AND SENESCENCE PARAMETERS -1.0 (prop) VWC ratio to calc. soil moisture limit 1 (prop. to FC-WP) -0.95 (prop) VWC ratio to calc. soil moisture limit 2 (prop. to SAT-FC) -0.4 (prop) minimum of soil moisture limit2 multiplicator (full anoxic stress value) -1000 (Pa) vapor pressure deficit: start of conductance reduction -2800 (Pa) vapor pressure deficit: complete conductance reduction -0.03 (prop.) maximum senescence mortality coefficient of aboveground plant material -0.02 (prop.) maximum senescence mortality coefficient of belowground plant material -0.01 (prop.) maximum senescence mortality coefficient of non-structured plant material -35 (Celsius) lower limit extreme high temperature effect on senescence mortality -40 (Celsius) upper limit extreme high temperature effect on senescence mortality -0.01 (prop.) turnover rate of wilted standing biomass to litter -0.047 (prop.) turnover rate of non-woody cut-down biomass to litter -0.01 (prop.) turnover rate of woody cut-down biomass to litter -30 (nday) drought tolerance parameter (critical value of DSWS) ----------------------------------------------------------------------------------------- -GROWING SEASON PARAMETERS -5 (kg/m2) crit. amount of snow limiting photosyn. -20 (Celsius) limit1 (under:full constrained) of HEATSUM index -60 (Celsius) limit2 (above:unconstrained) of HEATSUM index -0 (Celsius) limit1 (under:full constrained) of TMIN index -5 (Celsius) limit2 (above:unconstrained) of TMIN index -4000 (Pa) limit1 (above:full constrained) of VPD index -1000 (Pa) limit2 (under:unconstrained) of VPD index -0 (s) limit1 (under:full constrained) of DAYLENGTH index -0 (s) limit2 (above:unconstrained) of DAYLENGTH index -10 (day) moving average (to avoid the effects of extreme events) -0.10 (dimless) GSI limit1 (greater that limit -> start of vegper) -0.01 (dimless) GSI limit2 (less that limit -> end of vegper) ----------------------------------------------------------------------------------------- -PHENOLOGICAL (ALLOCATION) PARAMETERS (7 phenological phases) -phase1 phase2 phase3 phase4 phase5 phase6 phase7 (text) name of the phenophase -10000 200 500 200 400 200 100 (Celsius) length of phenophase (GDD) -0.3 0.3 0.3 0.3 0.3 0.3 0.3 (ratio) leaf ALLOCATION -0.5 0.5 0.5 0.5 0.5 0.5 0.5 (ratio) fine root ALLOCATION -0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ratio) fruit ALLOCATION -0.2 0.2 0.2 0.2 0.2 0.2 0.2 (ratio) soft stem ALLOCATION -0 0 0 0 0 0 0 (ratio) live woody stem ALLOCATION -0 0 0 0 0 0 0 (ratio) dead woody stem ALLOCATION -0 0 0 0 0 0 0 (ratio) live coarse root ALLOCATION -0 0 0 0 0 0 0 (ratio) dead coarse root ALLOCATION -49 49 49 49 49 49 49 (m2/kgC) canopy average specific leaf area (projected area basis) -0.37 0.37 0.37 0.37 0.37 0.37 0.37 (prop.) current growth proportion -10000 10000 10000 10000 10000 10000 10000 (Celsius) maximal lifetime of plant tissue \ No newline at end of file