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+% Generated by roxygen2: do not edit by hand
+% Please edit documentation in R/plotMuso.R
+\name{plotMusoWithData}
+\alias{plotMusoWithData}
+\title{plot the BBGCMuso output with data}
+\usage{
+plotMuso(settings, variable,
+timee="d", silent=TRUE,
+debugging=FALSE, keepEpc=FALSE,
+logfilename=NULL, aggressive=FALSE,
+leapYear=FALSE, export=FALSE)
+}
+\arguments{
+\item{csvFile}{The file of the measurement. It must contain a header.}
+
+\item{variable}{The name of the output variable to plot}
+
+\item{NACHAR}{This is not implemented yet}
+
+\item{settings}{You have to run the setupMuso function before rungetMuso. It is its output which contains all of the necessary system variables. It sets the whole environment}
+
+\item{sep}{This is the separator used in the measurement file}
+
+\item{savePlot}{It it is specified, the plot will be saved in a format specified with the immanent extension}
+}
+\description{
+This function runs the BBGC-MuSo model and reads in its outputfile in a very structured way, and after that plot the results automaticly along with a given measurement
+}
+\author{
+Roland Hollos, Dora Hidy
+}