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Zoltán BARCZA 2023-02-08 10:51:40 +01:00 committed by GitHub
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@ -21,16 +21,22 @@ You can install the RBBGCMuso package in several ways depending on the operating
If you would like to install the RBBGCMuso package from Source, you have two options. If you would like to install the RBBGCMuso package from Source, you have two options.
a) Clone this repository, then build and run the package (further information is available here: [[http://kbroman.org/pkg_primer/pages/build.html][package build and install]]) a) Clone this repository, then build and run the package (further information is available here: [[http://kbroman.org/pkg_primer/pages/build.html][package build and install]])
or or
b) Install the devtools package first (recommended): b) Install the remotes package first (recommended):
#+BEGIN_SRC R :eval no #+BEGIN_SRC R :eval no
install.packages("devtools") install.packages("remotes")
#+END_SRC #+END_SRC
Then copy the following line into the R session and execute it: Then copy the following line into the R session and execute it:
#+BEGIN_SRC R :eval no #+BEGIN_SRC R :eval no
devtools::install_github("hollorol/RBBGCMuso/RBBGCMuso",upgrade="never") remotes::install_github("hollorol/RBBGCMuso/RBBGCMuso",upgrade="never")
#+END_SRC #+END_SRC
We provide support to Biome-BGCMuSo v7 via a separate branch (temporary solution that will eventually be merged into the master branch in the future):
#+BEGIN_SRC R :eval no
remotes::install_github("hollorol/RBBGCMuso/RBBGCMuso",ref="version7",upgrade="never")
#+END_SRC
If you use Linux, with Debian (version 8+) you can automate the whole installation process with curl via copying the following line into the Linux terminal: If you use Linux, with Debian (version 8+) you can automate the whole installation process with curl via copying the following line into the Linux terminal:
#+BEGIN_SRC bash :eval no #+BEGIN_SRC bash :eval no
bash <(curl -s https://raw.githubusercontent.com/hollorol/RBBGCMuso/Documentation/debianInstaller.sh) bash <(curl -s https://raw.githubusercontent.com/hollorol/RBBGCMuso/Documentation/debianInstaller.sh)