From d89266715f57fa2b6b9056ab108dc840fbf21670 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Zolt=C3=A1n=20BARCZA?= Date: Sat, 24 Oct 2020 14:20:20 +0200 Subject: [PATCH] Update README.org --- README.org | 5 +++-- 1 file changed, 3 insertions(+), 2 deletions(-) diff --git a/README.org b/README.org index 55a6f78..88aa3c7 100644 --- a/README.org +++ b/README.org @@ -220,10 +220,11 @@ A note from the Biome-BGC User's Guide: "Livewood is defined as the actively res Assume that we would like to dig a bit deeper with the model and understand the effect of changing ecophysiological variables on the model results. This can easily be performed with RBBGCMuso. Execute the following command in R/RStudio: #+BEGIN_SRC R :eval no -musoQuickEffect(calibrationPar = 13, startVal = 0, endVal = 9, nSteps = 5, outVar = 3009) +musoQuickEffect(calibrationPar = 13, startVal = 0, endVal = 9, nSteps = 5, outVar = 3009, yearNum=-1) #+END_SRC -This command selects the 13th line in the ecophysiological constants (EPC) file (this is base temperature), then it starts to replace the original value from 0 to 9 in 5 consecutive steps. In this example GPP is selected (variable number 3009, which is the 2nd variable), so the effect of varying base temperature on GPP is calculated using 5 simulations. The result is a spectacular plot where color coding is used distinguish the parameter values. +This command selects the 13th line in the ecophysiological constants (EPC) file (this is base temperature), then it starts to replace the original value from 0 to 9 in 5 consecutive steps. In this example GPP is selected (variable number 3009, which is the 2nd variable), so the effect of varying base temperature on GPP is calculated using 5 simulations. The result is a spectacular plot where color coding is used distinguish the parameter values. , yearNum=-1 means that the experiment is done for the last year of the simulation. Remember that in crop rotation simulations the effect might be invisible if there is a conflict between year number and crop type. + At present musoQuickEffect is not usable for the allocation parameters due to restrictions of the allocation fractions. *** Study the effect of ecophysiological parameters using paramSweep