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10 Commits
df88bb70d8 ... f515dcda51

Author SHA1 Message Date
Roland Hollós
f515dcda51
Merge pull request #26 from MilanFischer/master 
Too many processes started
 2024-04-13 08:16:56 +02:00
Hollos Roland
abca8c1c86 Reverting to accept Milan Fischer's contribution 
This reverts commit 30f2f4e0bc.
 2024-04-13 07:55:15 +02:00
Hollos Roland
30f2f4e0bc Avoide starting too many process 2024-04-13 07:31:07 +02:00
MilanFischer
5de8f2a23c
Update calibrateMuso.R 2024-04-13 00:57:34 +02:00
MilanFischer
e865097472
Update calibrateMuso.R 
Explicitly specify the environment in the multisession call
 2024-04-13 00:51:18 +02:00
MilanFischer
5ef318324c
Update calibrateMuso.R 2024-04-13 00:38:28 +02:00
MilanFischer
6e9f31234e
Update calibrateMuso.R 2024-04-13 00:35:30 +02:00
MilanFischer
f72e49a4a9
Update calibrateMuso.R 2024-04-13 00:29:20 +02:00
MilanFischer
9fc504f5c8
Update calibrateMuso.R 
numCores default value removed
 2024-04-13 00:27:09 +02:00
MilanFischer
73ab5d43f3
Update calibrateMuso.R 
numCores redefined
 2024-04-13 00:19:19 +02:00
1 changed files with 2 additions and 2 deletions
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RBBGCMuso/R/calibrateMuso.R
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@ -16,8 +16,8 @@ calibrateMuso <- function(measuredData, parameters =read.csv("parameters.csv", s
thread_prefix="thread", numCores = max(c(parallel::detectCores()-1,1)), pb = txtProgressBar(min=0, max=iterations, style=3),
maxLikelihoodEpc=TRUE,
pbUpdate = setTxtProgressBar, outputLoc="./", method="GLUE",lg = FALSE, w=NULL, ...){
future::plan(future::multisession(workers = numCores))
future::plan(future::multisession, workers = numCores)
file.remove(list.files(path = settings$inputLoc, pattern="progress.txt", recursive = TRUE, full.names=TRUE))
file.remove(list.files(path = settings$inputLoc, pattern="preservedCalib.csv", recursive = TRUE, full.names=TRUE))
unlink(file.path(settings$inputLoc,"thread"),recursive=TRUE)