39 lines
1.1 KiB
Bash
Executable File
39 lines
1.1 KiB
Bash
Executable File
#!/bin/bash
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DEBIAN_VERSION=$(cat /etc/debian_version)
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if (( $(echo "$DEBIAN_VERSION < 8" | bc -l )))
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then
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echo "Your Debian version is obsolated."
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exit 1
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fi
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#INREPO=$(cat /etc/apt/sources.list|grep -c jessie-cran35)
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if (( $(echo "$DEBIAN_VERSION < 9" | bc -l )))
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then
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apt-get install apt-transport-https
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apt-key adv --keyserver keys.gnupg.net --recv-key 'E19F5F87128899B192B1A2C2AD5F960A256A04AF'
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echo "deb https://cloud.r-project.org/bin/linux/debian jessie-cran35/" >> /etc/apt/sources.list
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apt-get update
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apt-get -y upgrade
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fi
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#installing devtools's system dependency-s on Debian and Ubuntu
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apt-get install --assume-yes build-essential libcurl4-gnutls-dev libxml2-dev libssl-dev r-base
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#Installing the dependences
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R --vanilla << EOF
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packagesToInstall <- c("devtools", "magrittr",
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"digest", "ggplot2",
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"latex2epr", "tibble",
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"tidyr", "limSolve", "rmarkdown")
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install.packages(packagesToInstall,repos="https://cran.rstudio.com/")
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EOF
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#Installing RBBGCMuso
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R --vanilla << EOF
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devtools::install_github("hollorol/RBBGCMuso/RBBGCMuso")
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EOF
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