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updated output list w units

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@ -174,39 +174,39 @@ One might be interested in carbon fluxes like Net Ecosystem Exchange (NEE), Gros
Below we list the most common output variables that can be calculated by the model.
#+BEGIN_SRC text
50 tsoil[0] - soil temperature of the topmost soil layer (0-3 cm) [Celsius]
171 evapotranspiration [kgH2O m-2 day-1, equivalent with mm day-1]
518 soil1c_total - total soil organic carbon content in the 1st soil pool [kgC m^{-2}]
519 soil2c_total - total soil organic carbon content in the 2nd soil pool [kgC m^{-2}]
520 soil3c_total - total soil organic carbon content in the 3rd soil pool [kgC m^{-2}]
521 soil4c_total - total carbon content in the recalcitrant SOC pool [kgC m^{-2}]
3061 total soilc - total SOC pool [kgC m^{-2}]
313 fruitc - carbon content of the fruit/yield pool [kgC m^{-2}] (this is used for frop yield estimation)
50 tsoil[0] - soil temperature of the topmost soil layer (0-3 cm) [Celsius]
171 evapotranspiration [kgH2O/m2/day, equivalent with mm/day]
518 soil1c_total - total soil organic carbon content in the 1st soil pool [kgC/m2]
519 soil2c_total - total soil organic carbon content in the 2nd soil pool [kgC/m2]
520 soil3c_total - total soil organic carbon content in the 3rd soil pool [kgC/m2]
521 soil4c_total - total carbon content in the recalcitrant SOC pool [kgC/m2]
3061 total soilc - total SOC pool [kgC/m2]
313 fruitc - carbon content of the fruit/yield pool [kgC/m2] (this is used for frop yield estimation)
2527 plant height [m]
2528 NDVI [dimless]
2528 NDVI [dimless]
2520 proj_lai - this is what we typically refer as Leaf Area Index [LAI]
2603 vwc[0] - volumetric soil water content of the 1st layer (0-3 cm) [m3 m^{-3}]
2604 vwc[1] - volumetric soil water content of the 2nd layer (3-10 cm) [m3 m^{-3}]
2605 vwc[2] - volumetric soil water content of the 3rd layer (10-30 cm) [m3 m^{-3}]
2606 vwc[3] - volumetric soil water content of the 4th layer (30-60 cm) [m3 m^{-3}]
2607 vwc[4] - volumetric soil water content of the 5th layer (60-90 cm) [m3 m^{-3}]
2608 vwc[5] - volumetric soil water content of the 6th layer (90-120 cm) [m3 m^{-3}]
2609 vwc[6] - volumetric soil water content of the 7th layer (120-150 cm) [m3 m^{-3}]
3006 daily_npp - daily Net Primary Production [kgC m-2 day-1]
3005 daily_nep - daily Net Ecosystem Production (estimated by -NEE) [kgC m-2 day-1]
3009 daily_gpp - daily Gross Primary Production [kgC m-2 day-1]
3037 cum_yieldC_HRV - harvested fruit that is crop yield in case of croplands [kgC m-2]
75 GDD - growing degree day, used for the phenophase length calculations
1531 SUM of the soil mineral NH4+ in the total soil column [kgN m-2]
1532 SUM of the soil mineral NO3- in the total soil column [kgN m-2]
3013 daily soil respiration [kgC m-2 day]
307 leafC - total leaf carbon content [kgC m-2]
310 fine root C - total fine root carbon content [kgC m-2]
316 soft stem C - total soft stem carbon content [kgC m-2] (only for herbaceous vegetation)
407 standing dead biomass [kgC m-2] - that is the inactive standing plant pool not yet part of the litter pool
319 livestemC - aboveground live woody biomass [kgC m-2]
322 deadstemC - aboveground dead woody biomass [kgC m-2]
401 CWD - coarse woody debris [kgC m-2]
2603 vwc[0] - volumetric soil water content of the 1st layer (0-3 cm) [m3/m3]
2604 vwc[1] - volumetric soil water content of the 2nd layer (3-10 cm) [m3/m3]
2605 vwc[2] - volumetric soil water content of the 3rd layer (10-30 cm) [m3/m3]
2606 vwc[3] - volumetric soil water content of the 4th layer (30-60 cm) [m3/m3]
2607 vwc[4] - volumetric soil water content of the 5th layer (60-90 cm) [m3/m3]
2608 vwc[5] - volumetric soil water content of the 6th layer (90-120 cm) [m3/m3]
2609 vwc[6] - volumetric soil water content of the 7th layer (120-150 cm) [m3/m3]
3006 daily_npp - daily Net Primary Production [kgC/m2/day]
3005 daily_nep - daily Net Ecosystem Production (estimated by -NEE) [kgC/m2/day]
3009 daily_gpp - daily Gross Primary Production [kgC/m2/day]
3037 cum_yieldC_HRV - harvested fruit that is crop yield in case of croplands [kgC/m2]
75 GDD - growing degree day, used for the phenophase length calculations
1531 SUM of the soil mineral NH4+ in the total soil column [kgN/m2]
1532 SUM of the soil mineral NO3- in the total soil column [kgN/m2]
3013 daily soil respiration [kgC/m2/day]
307 leafC - total leaf carbon content [kgC/m2]
310 fine root C - total fine root carbon content [kgC/m2]
316 soft stem C - total soft stem carbon content [kgC/m2] (only for herbaceous vegetation)
407 standing dead biomass [kgC/m2] - that is the inactive standing plant pool not yet part of the litter pool
319 livestemC - aboveground live woody biomass [kgC/m2]
322 deadstemC - aboveground dead woody biomass [kg/m2]
401 CWD - coarse woody debris [kgC/m2]
#+END_SRC
A note from the Biome-BGC User's Guide: "Livewood is defined as the actively respiring woody tissue, that is, the lateral sheathing meristem of phloem tissue, plus any ray parenchyma extending radially into thexylem tissue. Deadwood consists of all the other woody material, including the heartwood, the xylem, and the bark."