updating files in version 7
This commit is contained in:
Zoltan BARCZA
parent
cea45458f9
commit
d34d6b08b0
142
RBBGCMuso/inst/examples/hhs/backup/c3grass_muso7.epc
Normal file
142
RBBGCMuso/inst/examples/hhs/backup/c3grass_muso7.epc
Normal file
@ -0,0 +1,142 @@
|
||||
ECOPHYS FILE - C3 grass muso6
|
||||
----------------------------------------------------------------------------------------
|
||||
FLAGS
|
||||
0 (flag) biome type flag (1 = WOODY 0 = NON-WOODY)
|
||||
0 (flag) woody type flag (1 = EVERGREEN 0 = DECIDUOUS)
|
||||
1 (flag) photosyn. type flag (1 = C3 PSN 0 = C4 PSN)
|
||||
----------------------------------------------------------------------------------------
|
||||
PLANT FUNCTIONING PARAMETERS
|
||||
0 (yday) yearday to start new growth (when phenology flag = 0)
|
||||
364 (yday) yearday to end litterfall (when phenology flag = 0)
|
||||
0.5 (prop.) transfer growth period as fraction of growing season (when transferGDD_flag = 0)
|
||||
0.5 (prop.) litterfall as fraction of growing season (when transferGDD_flag = 0)
|
||||
0 (Celsius) base temperature
|
||||
-9999 (Celsius) minimum temperature for growth displayed on current day (-9999: no T-dependence of allocation)
|
||||
-9999 (Celsius) optimal1 temperature for growth displayed on current day (-9999: no T-dependence of allocation)
|
||||
-9999 (Celsius) optimal2 temperature for growth displayed on current day (-9999: no T-dependence of allocation)
|
||||
-9999 (Celsius) maxmimum temperature for growth displayed on current day (-9999: no T-dependence of allocation)
|
||||
-9999 (Celsius) minimum temperature for carbon assimilation displayed on current day (-9999: no limitation)
|
||||
-9999 (Celsius) optimal1 temperature for carbon assimilation displayed on current day (-9999: no limitation)
|
||||
-9999 (Celsius) optimal2 temperature for carbon assimilation displayed on current day (-9999: no limitation)
|
||||
-9999 (Celsius) maxmimum temperature for carbon assimilation displayed on current day (-9999: no limitation)
|
||||
30 (Celsius) threshold temperature for ET-calculation (line 57 in INI file) using PT-method (-9999: no data - only PM-method)
|
||||
1.0 (1/yr) annual leaf and fine root turnover fraction
|
||||
0.00 (1/yr) annual live wood turnover fraction
|
||||
0.03 (1/yr) annual fire mortality fraction
|
||||
0.01 (1/vegper) whole-plant mortality fraction in vegetation period
|
||||
0.2 (prop) dead stem biomass combustion proportion
|
||||
0.3 (prop) coarse woody biomass combustion proportion
|
||||
36.6 (kgC/kgN) C:N of leaves
|
||||
45.0 (kgC/kgN) C:N of leaf litter, after retranslocation
|
||||
50.0 (kgC/kgN) C:N of fine roots
|
||||
36.6 *(kgC/kgN) C:N of fruit
|
||||
36.6 (kgC/kgN) C:N of soft stem
|
||||
0.0 *(kgC/kgN) C:N of live wood
|
||||
0.0 *(kgC/kgN) C:N of dead wood
|
||||
0.4 (kgC/kgDM) dry matter carbon content of leaves
|
||||
0.4 (kgC/kgDM) dry matter carbon content of leaf litter
|
||||
0.4 (kgC/kgDM) dry matter carbon content of fine roots
|
||||
0.4 *(kgC/kgDM) dry matter carbon content of fruit
|
||||
0.4 (kgC/kgDM) dry matter carbon content of soft stem
|
||||
0.4 *(kgC/kgDM) dry matter carbon content of live wood
|
||||
0.4 *(kgC/kgDM) dry matter carbon content of dead wood
|
||||
0.68 (DIM) leaf litter labile proportion
|
||||
0.23 (DIM) leaf litter cellulose proportion
|
||||
0.34 (DIM) fine root labile proportion
|
||||
0.44 (DIM) fine root cellulose proportion
|
||||
0.68 *(DIM) fruit litter labile proportion
|
||||
0.23 *(DIM) fruit litter cellulose proportion
|
||||
0.68 (DIM) soft stem litter labile proportion
|
||||
0.23 (DIM) soft stem litter cellulose proportion
|
||||
0.00 *(DIM) dead wood cellulose proportion
|
||||
0.01 (1/LAI/d) canopy water interception coefficient
|
||||
0.63 (DIM) canopy light extinction coefficient
|
||||
2.0 (g/MJ) potential radiation use efficiency
|
||||
0.781 (DIM) radiation parameter1 (Jiang et al.2015)
|
||||
-13.596 (DIM) radiation parameter2 (Jiang et al.2015)
|
||||
2.0 (DIM) all-sided to projected leaf area ratio
|
||||
2.0 (DIM) ratio of shaded SLA:sunlit SLA
|
||||
0.14 (DIM) fraction of leaf N in Rubisco
|
||||
0.03 (DIM) fraction of leaf N in PEP Carboxylase
|
||||
0.004 (m/s) maximum stomatal conductance (projected area basis)
|
||||
0.00006 (m/s) cuticular conductance (projected area basis)
|
||||
0.04 (m/s) boundary layer conductance (projected area basis)
|
||||
1.5 (m) maximum height of plant
|
||||
0.8 (kgC) stem weight corresponding to maximum height
|
||||
0.5 (dimless) plant height function shape parameter (slope)
|
||||
4.0 (m) maximum depth of rooting zone
|
||||
3.67 (DIM) root distribution parameter
|
||||
0.4 (kgC) root weight corresponding to max root depth
|
||||
0.5 (dimless) root depth function shape parameter (slope)
|
||||
1000 (m/kg) root weight to root length conversion factor
|
||||
0.3 (prop.) growth resp per unit of C grown
|
||||
0.218 (kgC/kgN/d) maintenance respiration in kgC/day per kg of tissue N
|
||||
0.1 (DIM) theoretical maximum prop. of non-structural and structural carbohydrates
|
||||
0.24 (DIM) prop. of non-structural carbohydrates available for maintanance respiration
|
||||
0.02 (kgN/m2/yr) symbiotic+asymbiotic fixation of N
|
||||
0 (day) time delay for temperature in photosynthesis acclimation
|
||||
----------------------------------------------------------------------------------------
|
||||
CROP SPECIFIC PARAMETERS
|
||||
0 (DIM) number of phenophase of germination (from 1 to 7; 0: NO specific)
|
||||
0 (DIM) number of phenophase of emergence (from 1 to 7; 0: NO specific)
|
||||
0.5 (prop.) critical VWCratio (prop. to FC-WP) in germination
|
||||
0 (DIM) number of phenophase of photoperiodic slowing effect (from 1 to 7; 0: NO effect)
|
||||
20 (hour) critical photoslow daylength
|
||||
0.005 (DIM) slope of relative photoslow development rate
|
||||
0 (DIM) number of phenophase of vernalization (from 1 to 7; 0: NO effect)
|
||||
0 (Celsius) critical vernalization temperature 1
|
||||
5 (Celsius) critical vernalization temperature 2
|
||||
8 (Celsius) critical vernalization temperature 3
|
||||
15 (Celsius) critical vernalization temperature 4
|
||||
0.04 (DIM) slope of relative vernalization development rate
|
||||
50 (n) required vernalization days (in vernalization development rate)
|
||||
0 (DIM) number of flowering phenophase (from 1 to 7;0: NO effect)
|
||||
35 (Celsius) critical flowering heat stress temperature 1
|
||||
40 (Celsius) critical flowering heat stress temperature 2
|
||||
0.2 (prop.) theoretical maximum of flowering thermal stress mortality parameter
|
||||
----------------------------------------------------------------------------------------
|
||||
STRESS AND SENESCENCE PARAMETERS
|
||||
0.5 (prop) VWC ratio to calc. soil moisture limit 1 (prop. to FC-WP)
|
||||
0.99 (prop) VWC ratio to calc. soil moisture limit 2 (prop. to SAT-FC)
|
||||
0.4 (prop) minimum of soil moisture limit2 multiplicator (full anoxic stress value)
|
||||
1000 (Pa) vapor pressure deficit: start of conductance reduction
|
||||
4000 (Pa) vapor pressure deficit: complete conductance reduction
|
||||
0.003 (prop.) maximum senescence mortality coefficient of aboveground plant material
|
||||
0.001 (prop.) maximum senescence mortality coefficient of belowground plant material
|
||||
0.0 (prop.) maximum senescence mortality coefficient of non-structured plant material
|
||||
35 (Celsius) lower limit extreme high temperature effect on senescence mortality
|
||||
40 (Celsius) upper limit extreme high temperature effect on senescence mortality
|
||||
0.01 (prop.) turnover rate of wilted standing biomass to litter
|
||||
0.047 (prop.) turnover rate of non-woody cut-down biomass to litter
|
||||
0.01 (prop.) turnover rate of woody cut-down biomass to litter
|
||||
17 (nday) drought tolerance parameter (critical value of DSWS)
|
||||
0.3 (prop) soil water deficit effect on photosynthesis downregulation
|
||||
----------------------------------------------------------------------------------------
|
||||
GROWING SEASON PARAMETERS
|
||||
5 (kg/m2) crit. amount of snow limiting photosyn.
|
||||
20 (Celsius) limit1 (under:full constrained) of HEATSUM index
|
||||
60 (Celsius) limit2 (above:unconstrained) of HEATSUM index
|
||||
0 (Celsius) limit1 (under:full constrained) of TMIN index
|
||||
5 (Celsius) limit2 (above:unconstrained) of TMIN index
|
||||
4000 (Pa) limit1 (above:full constrained) of VPD index
|
||||
1000 (Pa) limit2 (under:unconstrained) of VPD index
|
||||
0 (s) limit1 (under:full constrained) of DAYLENGTH index
|
||||
0 (s) limit2 (above:unconstrained) of DAYLENGTH index
|
||||
10 (day) moving average (to avoid the effects of extreme events)
|
||||
0.10 (dimless) GSI limit1 (greater that limit -> start of vegper)
|
||||
0.01 (dimless) GSI limit2 (less that limit -> end of vegper)
|
||||
----------------------------------------------------------------------------------------
|
||||
PHENOLOGICAL (ALLOCATION) PARAMETERS (7 phenological phases)
|
||||
phase1 phase2 phase3 phase4 phase5 phase6 phase7 (text) name of the phenophase
|
||||
5000 200 500 200 400 200 100 (Celsius) length of phenophase (GDD)
|
||||
0.3 0.4 0.4 0.4 0.4 0.4 0.4 (ratio) leaf ALLOCATION
|
||||
0.5 0.4 0.4 0.4 0.4 0.4 0.4 (ratio) fine root ALLOCATION
|
||||
0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ratio) fruit ALLOCATION
|
||||
0.2 0.2 0.2 0.2 0.2 0.2 0.2 (ratio) soft stem ALLOCATION
|
||||
0 0 0 0 0 0 0 (ratio) live woody stem ALLOCATION
|
||||
0 0 0 0 0 0 0 (ratio) dead woody stem ALLOCATION
|
||||
0 0 0 0 0 0 0 (ratio) live coarse root ALLOCATION
|
||||
0 0 0 0 0 0 0 (ratio) dead coarse root ALLOCATION
|
||||
49 49 49 49 49 49 49 (m2/kgC) canopy average specific leaf area (projected area basis)
|
||||
0.37 0.37 0.37 0.37 0.37 0.37 0.37 (prop.) current growth proportion
|
||||
10000 10000 10000 10000 10000 10000 10000 (Celsius) maximal lifetime of plant tissue
|
||||
17
RBBGCMuso/inst/examples/hhs/backup/parameters.csv
Normal file
17
RBBGCMuso/inst/examples/hhs/backup/parameters.csv
Normal file
@ -0,0 +1,17 @@
|
||||
ABREVIATION,INDEX,min,max
|
||||
TRANSFERGROWTHP,11,0.1,1
|
||||
T_BASE,13,0,8
|
||||
CN_leaf,29,14.3,58.8
|
||||
CWIC,52,0.01,0.07
|
||||
CLEC,53,0.3,0.8
|
||||
FLNR,59,0.1,0.4
|
||||
MSTOMACOND,61,0.001,0.007
|
||||
BOUNDARYLAYERCOND,63,0.001,0.05
|
||||
ROOTDEPTH,67,0.5,3
|
||||
ROOTDISTRIB,68,0.2,5
|
||||
NFIXATION,76,0.002,0.03
|
||||
RELSWCCRIT1,99,0.4,1
|
||||
SENESCENCABG,104,0,0.1
|
||||
TURNOVEROFDEADBIOMASS,109,0.01,0.4
|
||||
SLA1,140.60,20,50
|
||||
CURRENTGROWTHPROP1,141.60,0.2,1.0
|
||||
|
22
RBBGCMuso/inst/examples/hhs/backup/parameters2.csv
Normal file
22
RBBGCMuso/inst/examples/hhs/backup/parameters2.csv
Normal file
@ -0,0 +1,22 @@
|
||||
ABREVIATION,INDEX,min,max
|
||||
TRANSFERGROWTHP,11,0.1,1
|
||||
T_BASE,13,0,8
|
||||
WPM,26,0,0.1
|
||||
CN_leaf,29,14.3,58.8
|
||||
CWIC,52,0.01,0.07
|
||||
CLEC,53,0.3,0.8
|
||||
FLNR,59,0.1,0.2
|
||||
MSTOMACOND,61,0.001,0.007
|
||||
ROOTDEPTH,67,0.5,3
|
||||
ROOTDISTRIB,68,0.2,5
|
||||
RELSWCCRIT1,99,0.97,1
|
||||
RELSWCCRIT2,100,0.4,1
|
||||
SENESCENCABG,104,0,0.1
|
||||
AllocP_l, 132.60,0,1
|
||||
AllocP_fr,133.60,0,1
|
||||
AllocP_fr,134.60,0,0
|
||||
AllocP_ss,135.60,0,1
|
||||
AllocP_ls,136.60,0,0
|
||||
AllocP_ds,137.60,0,0
|
||||
AllocP_lr,138.60,0,0
|
||||
AllocP_dr,139.60,0,0
|
||||
|
Loading…
Reference in New Issue
Block a user