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RBBGCMuso/inst/examples/hhs/CO2_from1961.txt
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55
RBBGCMuso/inst/examples/hhs/CO2_from1961.txt
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1961 317.33
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1962 318.08
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1963 318.70
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1964 319.36
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|
1965 320.02
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1966 321.09
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1967 321.99
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1968 322.93
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1969 324.21
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1970 325.24
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1971 326.06
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1972 327.18
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1973 328.84
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1974 329.73
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1975 330.73
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1976 331.83
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1977 333.25
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1978 334.60
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1979 336.85
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1980 338.69
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1981 339.93
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1982 341.13
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1983 342.78
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1984 344.42
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1985 345.90
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1986 347.15
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1987 348.93
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1988 351.48
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1989 352.91
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1990 354.19
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1991 355.59
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1992 356.37
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1993 357.04
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1994 358.88
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1995 360.88
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1996 362.64
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1997 363.76
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1998 366.63
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1999 368.31
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2000 369.48
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2001 372.59
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2002 374.37
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2003 378.04
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2004 380.88
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2005 383.88
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2006 385.64
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2007 385.76
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2008 386.13
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2009 387.37
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2010 389.85
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2011 391.62
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2012 393.82
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2013 396.48
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2014 398.61
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2015 400.00
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180
RBBGCMuso/inst/examples/hhs/c3grass.epc
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180
RBBGCMuso/inst/examples/hhs/c3grass.epc
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ECOPHYS FILE - C3 grass muso5
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----------------------------------------------------------------------------------------
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FLAGS
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0 (flag) biome type flag (1 = WOODY 0 = NON-WOODY)
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0 (flag) woody type flag (1 = EVERGREEN 0 = DECIDUOUS)
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1 (flag) photosyn. type flag (1 = C3 PSN 0 = C4 PSN)
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1 (flag) phenology flag (1 = MODEL PHENOLOGY 0 = USER-SPECIFIED PHENOLOGY)
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0 (flag) transferGDD flag (1= transfer calc. from GDD 0 = transfer calc. from EPC)
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1 (flag) q10 flag (1 = temperature dependent q10 value; 0= constans q10 value)
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0 (flag) acclimation flag (1 = acclimation 0 = no acclimation)
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1 (flag) CO2 conductance reduction flag (0: no effect, 1: multiplier)
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1 (flag) use GSI index to calculate growing season (0: no GSI, 1: GSI)
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0 (flag) soil temperature calculation method (0: Zheng, 1: DSSAT)
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1 (flag) soil hydrological calculation method (0: Richards, 1: tipping DSSAT)
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0 (int) discretization level of SWC calculation (0: low, 1: medium, 2: high)
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0 (flag) photosynthesis calculation method (0: Farquhar, 1: DSSAT)
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0 (flag) evapotranspiration calculation method (0: Penman-Montieth, 1: Priestly-Taylor)
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0 (flag) radiation calculation method (0: SWabs, 1: Rn)
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----------------------------------------------------------------------------------------
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PLANT FUNCTIONING PARAMETERS
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0 (yday) yearday to start new growth (when phenology flag = 0)
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364 (yday) yearday to end litterfall (when phenology flag = 0)
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0.5 (prop.) transfer growth period as fraction of growing season (when transferGDD_flag = 0)
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0.5 (prop.) litterfall as fraction of growing season (when transferGDD_flag = 0)
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5 (Celsius) base temperature
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-9999 (Celsius) minimum temperature for growth displayed on current day (-9999: no T-dependence of allocation)
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-9999 (Celsius) optimal1 temperature for growth displayed on current day (-9999: no T-dependence of allocation)
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-9999 (Celsius) optimal2 temperature for growth displayed on current day (-9999: no T-dependence of allocation)
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-9999 (Celsius) maxmimum temperature for growth displayed on current day (-9999: no T-dependence of allocation)
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-9999 (Celsius) minimum temperature for carbon assimilation displayed on current day (-9999: no limitation)
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-9999 (Celsius) optimal1 temperature for carbon assimilation displayed on current day (-9999: no limitation)
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-9999 (Celsius) optimal2 temperature for carbon assimilation displayed on current day (-9999: no limitation)
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-9999 (Celsius) maxmimum temperature for carbon assimilation displayed on current day (-9999: no limitation)
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1.0 (1/yr) annual leaf and fine root turnover fraction
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0.00 (1/yr) annual live wood turnover fraction
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0.01 (1/yr) annual whole-plant mortality fraction
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0.0 (1/yr) annual fire mortality fraction
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36.6 (kgC/kgN) C:N of leaves
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45.0 (kgC/kgN) C:N of leaf litter, after retranslocation
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50.0 (kgC/kgN) C:N of fine roots
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36.6 *(kgC/kgN) C:N of fruit
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36.6 (kgC/kgN) C:N of soft stem
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0.0 *(kgC/kgN) C:N of live wood
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0.0 *(kgC/kgN) C:N of dead wood
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0.68 (DIM) leaf litter labile proportion
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0.23 (DIM) leaf litter cellulose proportion
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0.34 (DIM) fine root labile proportion
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0.44 (DIM) fine root cellulose proportion
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0.68 *(DIM) fruit litter labile proportion
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0.23 *(DIM) fruit litter cellulose proportion
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0.68 (DIM) soft stem litter labile proportion
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0.23 (DIM) soft stem litter cellulose proportion
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0.00 *(DIM) dead wood cellulose proportion
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0.01 (1/LAI/d) canopy water interception coefficient
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0.63 (DIM) canopy light extinction coefficient
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2.0 (g/MJ) potential radiation use efficiency
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0.781 (DIM) radiation parameter1 (Jiang et al.2015)
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-13.596 (DIM) radiation parameter2 (Jiang et al.2015)
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2.0 (DIM) all-sided to projected leaf area ratio
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2.0 (DIM) ratio of shaded SLA:sunlit SLA
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0.2 (DIM) fraction of leaf N in Rubisco
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0.03 (DIM) fraction of leaf N in PEP Carboxylase
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0.004 (m/s) maximum stomatal conductance (projected area basis)
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0.00006 (m/s) cuticular conductance (projected area basis)
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0.039 (m/s) boundary layer conductance (projected area basis)
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1.00 (prop) relative SWC (prop. to FC) to calc. soil moisture limit 1 (-9999: not used)
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0.99 (prop) relative SWC (prop. to SAT) to calc. soil moisture limit 2 (-9999: not used)
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-9999 (prop) relative PSI (prop. to FC) to calc. soil moisture limit 1 (-9999: not used)
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-9999 (prop) relative PSI (prop. to SAT) to calc. soil moisture limit 2 (-9999: not used)
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1000 (Pa) vapor pressure deficit: start of conductance reduction
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5000 (Pa) vapor pressure deficit: complete conductance reduction
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1.5 (m) maximum height of plant
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250 *(kgC/m2) stem weight at which maximum height attended
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1.0 (m) maximum depth of rooting zone
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3.67 (DIM) root distribution parameter
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0.4 (kgC/m2) rootlenght parameter 1 (estimated max root weight)
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0.5 (prop.) rootlenght parameter 2 (slope)
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0.3 (prop.) growth resp per unit of C grown
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0.195 (kgC/kgN/d) maintenance respiration in kgC/day per kg of tissue N
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0.1 (DIM) theoretical maximum prop. of non-structural and structural carbohydrates
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0.24 (DIM) prop. of non-structural carbohydrates available for maintanance respiration
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0.0048 (kgN/m2/yr) symbiotic+asymbiotic fixation of N
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----------------------------------------------------------------------------------------
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CROP SPECIFIC PARAMETERS
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0 (DIM) number of phenophase of germination (from 1 to 7; 0: NO specific)
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0 (DIM) number of phenophase of emergence (from 1 to 7; 0: NO specific)
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0.5 (prop.) critical relative SWC (prop. to FC) in germination
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-9999 (DIM) number of phenophase of photoperiodic slowing effect (from 1 to 7; -9999: NO effect)
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20 (hour) critical photoslow daylength
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0.005 (DIM) slope of relative photoslow development rate
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-9999 (DIM) number of phenophase of vernalization (from 1 to 7; -9999: NO)
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0 (Celsius) critical vernalization temperature 1
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5 (Celsius) critical vernalization temperature 2
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8 (Celsius) critical vernalization temperature 3
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15 (Celsius) critical vernalization temperature 4
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0.04 (DIM) slope of relative vernalization development rate
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50 (n) required vernalization days (in vernalization development rate)
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-9999 (DIM) number of flowering phenophase (from 1 to 7; -9999: NO effect)
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35 (Celsius) critical flowering heat stress temperature 1
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40 (Celsius) critical flowering heat stress temperature 2
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0.2 (prop.) mortality parameter of flowering thermal stress
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----------------------------------------------------------------------------------------
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SENESCENCE AND SOIL PARAMETERS
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0.1 (prop.) maximum senescence mortality coefficient of aboveground plant material
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0.05 (prop.) maximum senescence mortality coefficient of belowground plant material
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0.0 (prop.) maximum senescence mortality coefficient of non-structured plant material
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2 (prop) effect of extreme high temperature on senesncene mortality
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30 (Celsius) lower limit extreme high temperature effect on senescence mortality
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40 (Celsius) upper limit extreme high temperature effect on senescence mortality
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-9999 (Celsius) maximal lifetime of plant tissue (-9999: no genetically programmed senescence)
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0.01 (prop.) turnover rate of wilted standing biomass to litter
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0.047 (prop.) turnover rate of non-woody cut-down biomass to litter
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0.01 (prop.) turnover rate of woody cut-down biomass to litter
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17 (prop.) drought tolerance parameter (critical value of DSWS)
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0.02 (prop.) denitrification rate per g of CO2 respiration of SOM
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0.2 (prop.) nitrification coefficient 1
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0.07 (prop.) nitrification coefficient 2
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0.02 (prop.) coefficient of N2O emission of nitrification
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0.5 (prop.) proprortion of NH4 flux of N-deposition
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0.5 (prop.) NH4 mobilen proportion
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1.0 (prop.) NO3 mobilen proportion
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10 (m) e-folding depth of decomposition rate's depth scalar
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0.001 (prop.) fraction of dissolved part of SOIL1 organic matter
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0.001 (prop.) fraction of dissolved part of SOIL2 organic matter
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0.001 (prop.) fraction of dissolved part of SOIL3 organic matter
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0.001 (prop.) fraction of dissolved part of SOIL4 organic matter
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0.6 (DIM) ratio of bare soil evaporation and pot.evaporation
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----------------------------------------------------------------------------------------
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RATE SCALARS
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0.39 (DIM) respiration fractions for fluxes between compartments (l1s1)
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0.55 (DIM) respiration fractions for fluxes between compartments (l2s2)
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0.29 (DIM) respiration fractions for fluxes between compartments (l4s3)
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0.28 (DIM) respiration fractions for fluxes between compartments (s1s2)
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0.46 (DIM) respiration fractions for fluxes between compartments (s2s3)
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0.55 (DIM) respiration fractions for fluxes between compartments (s3s4)
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0.7 (DIM) rate constant scalar of labile litter pool
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0.07 (DIM) rate constant scalar of cellulose litter pool
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0.014 (DIM) rate constant scalar of lignin litter pool
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0.07 (DIM) rate constant scalar of fast microbial recycling pool
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0.014 (DIM) rate constant scalar of medium microbial recycling pool
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0.0014 (DIM) rate constant scalar of slow microbial recycling pool
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0.0001 (DIM) rate constant scalar of recalcitrant SOM (humus) pool
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0.001 (DIM) rate constant scalar of physical fragmentation of coarse woody debris
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----------------------------------------------------------------------------------------
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GROWING SEASON PARAMETERS
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5 (kg/m2) crit. amount of snow limiting photosyn.
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20 (Celsius) limit1 (under:full constrained) of HEATSUM index
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60 (Celsius) limit2 (above:unconstrained) of HEATSUM index
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0 (Celsius) limit1 (under:full constrained) of TMIN index
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5 (Celsius) limit2 (above:unconstrained) of TMIN index
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4000 (Pa) limit1 (above:full constrained) of VPD index
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1000 (Pa) limit2 (under:unconstrained) of VPD index
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0 (s) limit1 (under:full constrained) of DAYLENGTH index
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0 (s) limit2 (above:unconstrained) of DAYLENGTH index
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10 (day) moving average (to avoid the effects of extreme events)
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0.10 (dimless) GSI limit1 (greater that limit -> start of vegper)
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0.01 (dimless) GSI limit2 (less that limit -> end of vegper)
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----------------------------------------------------------------------------------------
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CH4 PARAMETERS
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212.5 (DIM) param1 for CH4 calculations (empirical function of BD)
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1.81 (DIM) param2 for CH4 calculations (empirical function of BD)
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-1.353 (DIM) param1 for CH4 calculations (empirical function of VWC)
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0.2 (DIM) param2 for CH4 calculations (empirical function of VWC)
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1.781 (DIM) param3 for CH4 calculations (empirical function of VWC)
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6.786 (DIM) param4 for CH4 calculations (empirical function of VWC)
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0.010 (DIM) param1 for CH4 calculations (empirical function of Tsoil)
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----------------------------------------------------------------------------------------
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PHENOLOGICAL (ALLOCATION) PARAMETERS (7 phenological phases)
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phase1 phase2 phase3 phase4 phase5 phase6 phase7 (text) name of the phenophase
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500 200 500 200 400 200 100 (Celsius) length of phenophase (GDD)
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0.4 0.4 0.4 0.4 0.4 0.4 0.4 (ratio) leaf ALLOCATION
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0.4 0.4 0.4 0.4 0.4 0.4 0.4 (ratio) fine root ALLOCATION
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0.0 0.0 0.0 0.0 0.0 0.0 0.0 (ratio) fruit ALLOCATION
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0.2 0.2 0.2 0.2 0.2 0.2 0.2 (ratio) soft stem ALLOCATION
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0 0 0 0 0 0 0 (ratio) live woody stem ALLOCATION
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0 0 0 0 0 0 0 (ratio) dead woody stem ALLOCATION
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0 0 0 0 0 0 0 (ratio) live coarse root ALLOCATION
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0 0 0 0 0 0 0 (ratio) dead coarse root ALLOCATION
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49 49 49 49 49 49 49 (m2/kgC) canopy average specific leaf area (projected area basis)
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0.37 0.37 0.37 0.37 0.37 0.37 0.37 (prop.) current growth proportion
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BIN
RBBGCMuso/inst/examples/hhs/cygwin1.dll
Normal file
BIN
RBBGCMuso/inst/examples/hhs/cygwin1.dll
Normal file
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19714
RBBGCMuso/inst/examples/hhs/hhs_1961-2014.mtc43
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19714
RBBGCMuso/inst/examples/hhs/hhs_1961-2014.mtc43
Normal file
File diff suppressed because it is too large
Load Diff
1464
RBBGCMuso/inst/examples/hhs/hhs_2013-2016.mtc43
Normal file
1464
RBBGCMuso/inst/examples/hhs/hhs_2013-2016.mtc43
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File diff suppressed because it is too large
Load Diff
180
RBBGCMuso/inst/examples/hhs/maize.epc
Normal file
180
RBBGCMuso/inst/examples/hhs/maize.epc
Normal file
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ECOPHYS FILE - MAIZE
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----------------------------------------------------------------------------------------
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FLAGS
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0 (flag) biome type flag (1 = WOODY 0 = NON-WOODY)
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0 (flag) woody type flag (1 = EVERGREEN 0 = DECIDUOUS)
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0 (flag) photosyn. type flag (1 = C3 PSN 0 = C4 PSN)
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0 (flag) phenology flag (1 = MODEL PHENOLOGY 0 = USER-SPECIFIED PHENOLOGY)
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1 (flag) transferGDD flag (1= transfer calc. from GDD 0 = transfer calc. from EPC)
|
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1 (flag) q10 flag (1 = temperature dependent q10 value; 0= constans q10 value)
|
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0 (flag) acclimation flag (1 = acclimation 0 = no acclimation)
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1 (flag) CO2 conductance reduction flag (0: no effect, 1: multiplier)
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0 (flag) use GSI index to calculate growing season (0: no GSI, 1: GSI)
|
||||||
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0 (flag) soil temperature calculation method (0: Zheng, 1: DSSAT)
|
||||||
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1 (flag) soil hydrological calculation method (0: Richards, 1: tipping DSSAT)
|
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0 (int) discretization level of SWC calculation (0: low, 1: medium, 2: high)
|
||||||
|
0 (flag) photosynthesis calculation method (0: Farquhar, 1: DSSAT)
|
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|
0 (flag) evapotranspiration calculation method (0: Penman-Montieth, 1: Priestly-Taylor)
|
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0 (flag) radiation calculation method (0: SWabs, 1: Rn)
|
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----------------------------------------------------------------------------------------
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PLANT FUNCTIONING PARAMETERS
|
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0 (yday) yearday to start new growth (when phenology flag = 0)
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364 (yday) yearday to end litterfall (when phenology flag = 0)
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0.4 (prop.) transfer growth period as fraction of growing season
|
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0. (prop.) litterfall as fraction of growing season
|
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8 (Celsius) base temperature
|
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-9999 (Celsius) minimum temperature for growth displayed on current day (-9999: no T-dependence of allocation)
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-9999 (Celsius) optimal1 temperature for growth displayed on current day (-9999: no T-dependence of allocation)
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-9999 (Celsius) optimal2 temperature for growth displayed on current day (-9999: no T-dependence of allocation)
|
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-9999 (Celsius) maxmimum temperature for growth displayed on current day (-9999: no T-dependence of allocation)
|
||||||
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-9999 (Celsius) minimum temperature for carbon assimilation displayed on current day (-9999: no limitation)
|
||||||
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-9999 (Celsius) optimal1 temperature for carbon assimilation displayed on current day (-9999: no limitation)
|
||||||
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-9999 (Celsius) optimal2 temperature for carbon assimilation displayed on current day (-9999: no limitation)
|
||||||
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-9999 (Celsius) maxmimum temperature for carbon assimilation displayed on current day (-9999: no limitation)
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1.0 (1/yr) annual leaf and fine root turnover fraction
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0.00 (1/yr) annual live wood turnover fraction
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0.0 (1/yr) annual whole-plant mortality fraction
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0.0 (1/yr) annual fire mortality fraction
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||||||
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40.0 (kgC/kgN) C:N of leaves
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65.0 (kgC/kgN) C:N of leaf litter, after retranslocation ion
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||||||
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42.0 (kgC/kgN) C:N of fine roots
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||||||
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50.0 *(kgC/kgN) C:N of fruit
|
||||||
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50.0 (kgC/kgN) C:N of soft stem
|
||||||
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0.0 (kgC/kgN) C:N of live wood
|
||||||
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0.0 (kgC/kgN) C:N of dead wood
|
||||||
|
0.68 (DIM) leaf litter labile proportion
|
||||||
|
0.23 (DIM) leaf litter cellulose proportion
|
||||||
|
0.34 (DIM) fine root labile proportion
|
||||||
|
0.44 (DIM) fine root cellulose proportion
|
||||||
|
0.68 *(DIM) fruit litter labile proportion
|
||||||
|
0.23 *(DIM) fruit litter cellulose proportion
|
||||||
|
0.68 (DIM) soft stem litter labile proportion
|
||||||
|
0.23 (DIM) soft stem litter cellulose proportion
|
||||||
|
0.00 *(DIM) dead wood cellulose proportion
|
||||||
|
0.01 (1/LAI/d) canopy water interception coefficient
|
||||||
|
0.69 (DIM) canopy light extinction coefficient
|
||||||
|
2.0 (g/MJ) potential radiation use efficiency
|
||||||
|
0.781 (DIM) radiation parameter1 (Jiang et al.2015)
|
||||||
|
-13.596 (DIM) radiation parameter2 (Jiang et al.2015)
|
||||||
|
2.0 (DIM) all-sided to projected leaf area ratio
|
||||||
|
2.0 (DIM) ratio of shaded SLA:sunlit SLA
|
||||||
|
0.14 (DIM) fraction of leaf N in Rubisco CLM alapjan
|
||||||
|
0.0424 (DIM) fraction of leaf N in PEP Carboxylase
|
||||||
|
0.012 (m/s) maximum stomatal conductance (projected area basis)
|
||||||
|
0.00006 (m/s) cuticular conductance (projected area basis)
|
||||||
|
0.04 (m/s) boundary layer conductance (projected area basis)
|
||||||
|
0.99 (prop) relative SWC (prop. to FC) to calc. soil moisture limit 1 (-9999: not used)
|
||||||
|
1.0 (prop) relative SWC (prop. to SAT) to calc. soil moisture limit 2 (-9999: not used)
|
||||||
|
-9999 (prop) relative PSI (prop. to FC) to calc. soil moisture limit 1 (-9999: not used)
|
||||||
|
-9999 (prop) relative PSI (prop. to SAT) to calc. soil moisture limit 2 (-9999: not used)
|
||||||
|
1000 (Pa) vapor pressure deficit: start of conductance reduction
|
||||||
|
5000 (Pa) vapor pressure deficit: complete conductance reduction
|
||||||
|
2.0 (m) maximum height of plant
|
||||||
|
25 *(kgC/m2) stem weight at which maximum height attended
|
||||||
|
1.7 (m) (m) maximum depth of rooting zonemaximum depth of rooting zone
|
||||||
|
3.67 (DIM) root distribution parameter
|
||||||
|
0.4 (kgC/m2) rootlenght parameter 1 (estimated max root weight)
|
||||||
|
0.5 (prop.) rootlenght parameter 2 (slope)
|
||||||
|
0.3 (prop.) growth resp per unit of C grown
|
||||||
|
0.218 (kgC/kgN/d) maintenance respiration in kgC/day per kg of tissue N
|
||||||
|
0.1 (DIM) theoretical maximum prop. of non-structural and structural carbohydrates
|
||||||
|
0.3 (DIM) prop. of non-structural carbohydrates available for maintanance respiration
|
||||||
|
0.0005 (kgN/m2/yr) symbiotic+asymbiotic fixation of N
|
||||||
|
----------------------------------------------------------------------------------------
|
||||||
|
CROP SPECIFIC PARAMETERS
|
||||||
|
2 (DIM) number of the first phenophase when germination is complete (from 2 to 7; 0: NO specific)
|
||||||
|
3 (DIM) number of the first phenophase when emergence is complete (from 3 to 7; 0: NO specific)
|
||||||
|
0.5 (prop.) critical relative SWC (prop. to FC) in germination
|
||||||
|
-9999 (DIM) number of phenophase of photoperiodic slowing effect (from 1 to 7; -9999: NO)
|
||||||
|
16 (hour) critical photoslow daylength
|
||||||
|
0.005 (DIM) slope of relative photoslow development rate
|
||||||
|
-9999 (DIM) number of phenophase of vernalization (from 1 to 7; -9999: NO)
|
||||||
|
0 (Celsius) critical vernalization temperature 1
|
||||||
|
5 (Celsius) critical vernalization temperature 2
|
||||||
|
8 (Celsius) critical vernalization temperature 3
|
||||||
|
15 (Celsius) critical vernalization temperature 4
|
||||||
|
0.04 (DIM) slope of relative vernalization development rate
|
||||||
|
50 (n) required vernalization days (in vernalization development rate)
|
||||||
|
5 (DIM) number of flowering phenophase (from 1 to 7; -9999: NO)
|
||||||
|
35 (Celsius) critical flowering heat stress temperature 1
|
||||||
|
40 (Celsius) critical flowering heat stress temperature 2
|
||||||
|
0.2 (prop.) mortality parameter of flowering thermal stress
|
||||||
|
----------------------------------------------------------------------------------------
|
||||||
|
SENESCENCE AND SOIL PARAMETERS
|
||||||
|
0.01 (prop.) maximum senescence mortality coefficient of aboveground plant material
|
||||||
|
0.01 (prop.) maximum senescence mortality coefficient of belowground plant material
|
||||||
|
0.0 (prop.) maximum senescence mortality coefficient of non-structured plant material
|
||||||
|
2 (prop) effect of extreme high temperature on senesncene mortality
|
||||||
|
35 (Celsius) lower limit extreme high temperature effect on senescence mortality
|
||||||
|
40 (Celsius) upper limit extreme high temperature effect on senescence mortality
|
||||||
|
1000 (Celsius) maximal lifetime of plant tissue (-9999: no genetically programmed senescence)
|
||||||
|
0.01 (prop.) turnover rate of wilted standing biomass to litter
|
||||||
|
0.05 (prop.) turnover rate of non-woody cut-down biomass to litter
|
||||||
|
0.01 (prop.) turnover rate of woody cut-down biomass to litter
|
||||||
|
30 (prop.) drought tolerance parameter (critical value of DSWS)
|
||||||
|
0.02 (prop.) denitrification rate per g of CO2 respiration of SOM
|
||||||
|
0.5 (prop.) nitrification coefficient 1
|
||||||
|
0.4 (prop.) nitrification coefficient 2
|
||||||
|
0.02 (prop.) coefficient of N2O emission of nitrification
|
||||||
|
0.5 (prop.) proprortion of NH4 flux of N-deposition
|
||||||
|
0.5 (prop.) NH4 mobilen proportion
|
||||||
|
1.0 (prop.) NO3 mobilen proportion
|
||||||
|
10 (m) e-folding depth of decomposition rate's depth scalar
|
||||||
|
0.001 (prop.) fraction of dissolved part of SOIL1 organic matter
|
||||||
|
0.001 (prop.) fraction of dissolved part of SOIL2 organic matter
|
||||||
|
0.001 (prop.) fraction of dissolved part of SOIL3 organic matter
|
||||||
|
0.001 (prop.) fraction of dissolved part of SOIL4 organic matter
|
||||||
|
0.6 (DIM) ratio of bare soil evaporation and pot.evaporation
|
||||||
|
----------------------------------------------------------------------------------------
|
||||||
|
RATE SCALARS
|
||||||
|
0.39 (DIM) respiration fractions for fluxes between compartments (l1s1)
|
||||||
|
0.55 (DIM) respiration fractions for fluxes between compartments (l2s2)
|
||||||
|
0.29 (DIM) respiration fractions for fluxes between compartments (l4s3)
|
||||||
|
0.28 (DIM) respiration fractions for fluxes between compartments (s1s2)
|
||||||
|
0.46 (DIM) respiration fractions for fluxes between compartments (s2s3)
|
||||||
|
0.55 (DIM) respiration fractions for fluxes between compartments (s3s4)
|
||||||
|
0.7 (DIM) rate constant scalar of labile litter pool
|
||||||
|
0.07 (DIM) rate constant scalar of cellulose litter pool
|
||||||
|
0.014 (DIM) rate constant scalar of lignin litter pool
|
||||||
|
0.07 (DIM) rate constant scalar of fast microbial recycling pool
|
||||||
|
0.014 (DIM) rate constant scalar of medium microbial recycling pool
|
||||||
|
0.0014 (DIM) rate constant scalar of slow microbial recycling pool
|
||||||
|
0.0001 (DIM) rate constant scalar of recalcitrant SOM (humus) pool
|
||||||
|
0.001 (DIM) rate constant scalar of physical fragmentation of coarse woody debris
|
||||||
|
----------------------------------------------------------------------------------------
|
||||||
|
GROWING SEASON PARAMETERS
|
||||||
|
5 (kg/m2) crit. amount of snow limiting photosyn.
|
||||||
|
20 (Celsius) limit1 (under:full constrained) of HEATSUM index
|
||||||
|
60 (Celsius) limit2 (above:unconstrained) of HEATSUM index
|
||||||
|
0 (Celsius) limit1 (under:full constrained) of TMIN index
|
||||||
|
5 (Celsius) limit2 (above:unconstrained) of TMIN index
|
||||||
|
4000 (Pa) limit1 (above:full constrained) of VPD index
|
||||||
|
1000 (Pa) limit2 (under:unconstrained) of VPD index
|
||||||
|
0 (s) limit1 (under:full constrained) of DAYLENGTH index
|
||||||
|
0 (s) limit2 (above:unconstrained) of DAYLENGTH index
|
||||||
|
10 (day) moving average (to avoid the effects of extreme events)
|
||||||
|
0.10 (dimless) GSI limit1 (greater that limit -> start of vegper)
|
||||||
|
0.01 (dimless) GSI limit2 (less that limit -> end of vegper)
|
||||||
|
----------------------------------------------------------------------------------------
|
||||||
|
CH4 PARAMETERS
|
||||||
|
212.5 (DIM) param1 for CH4 calculations (empirical function of BD)
|
||||||
|
1.81 (DIM) param2 for CH4 calculations (empirical function of BD)
|
||||||
|
-1.353 (DIM) param1 for CH4 calculations (empirical function of VWC)
|
||||||
|
0.2 (DIM) param2 for CH4 calculations (empirical function of VWC)
|
||||||
|
1.781 (DIM) param3 for CH4 calculations (empirical function of VWC)
|
||||||
|
6.786 (DIM) param4 for CH4 calculations (empirical function of VWC)
|
||||||
|
0.010 (DIM) param1 for CH4 calculations (empirical function of Tsoil)
|
||||||
|
----------------------------------------------------------------------------------------
|
||||||
|
PHENOLOGICAL (ALLOCATION) PARAMETERS (7 phenological phases)
|
||||||
|
germination emergence leafunfold leafunfoldlin flowering grainfilling maturity (text) name of the phenophase
|
||||||
|
0 45 225 630 90 730 10000 (Celsius) length of phenophase (GDD)
|
||||||
|
0.0 0.5 0.60 0.30 0.05 0.0 0. (ratio) leaf ALLOCATION
|
||||||
|
0.0 0.5 0.35 0.25 0.20 0.15 0. (ratio) fine root ALLOCATION
|
||||||
|
0.0 0. 0.0 0.0 0.05 0.65 1. (ratio) fruit ALLOCATION
|
||||||
|
0.0 0. 0.05 0.45 0.70 0.20 0. (ratio) soft stem ALLOCATION
|
||||||
|
0 0 0 0 0 0 0 (ratio) live woody stem ALLOCATION
|
||||||
|
0 0 0 0 0 0 0 (ratio) dead woody stem ALLOCATION
|
||||||
|
0 0 0 0 0 0 0 (ratio) live coarse root ALLOCATION
|
||||||
|
0 0 0 0 0 0 0 (ratio) dead coarse root ALLOCATION
|
||||||
|
50 50 50 50 50 50 50 (m2/kgC) canopy average specific leaf area (projected area basis)
|
||||||
|
1.0 1.0 1.0 1.0 1.0 1.0 1.0 (prop.) current growth proportion
|
||||||
BIN
RBBGCMuso/inst/examples/hhs/muso
Normal file
BIN
RBBGCMuso/inst/examples/hhs/muso
Normal file
Binary file not shown.
BIN
RBBGCMuso/inst/examples/hhs/muso.exe
Normal file
BIN
RBBGCMuso/inst/examples/hhs/muso.exe
Normal file
Binary file not shown.
229
RBBGCMuso/inst/examples/hhs/n.ini
Normal file
229
RBBGCMuso/inst/examples/hhs/n.ini
Normal file
@ -0,0 +1,229 @@
|
|||||||
|
BBGC_MuSo simulation (missing data: -9999)
|
||||||
|
|
||||||
|
MET_INPUT
|
||||||
|
hhs_2013-2016.mtc43 (filename) met file name
|
||||||
|
4 (int) number of header lines in met file
|
||||||
|
365 (int) number of simdays in last simyear (truncated year: < 365)
|
||||||
|
|
||||||
|
RESTART
|
||||||
|
1 (flag) 1 = read restart; 0 = dont read restart
|
||||||
|
0 (flag) 1 = write restart; 0 = dont write restart
|
||||||
|
0 (flag) 1 = use restart metyear; 0 = reset metyear
|
||||||
|
hhs.endpoint (filename) name of the input restart file
|
||||||
|
hhs.endpoint (filename) name of the output restart file
|
||||||
|
|
||||||
|
TIME_DEFINE
|
||||||
|
4 (int) number of meteorological data years
|
||||||
|
4 (int) number of simulation years
|
||||||
|
2013 (int) first simulation year
|
||||||
|
0 (flag) 1 = spinup run; 0 = normal run
|
||||||
|
6000 (int) maximum number of spinup years
|
||||||
|
|
||||||
|
CLIM_CHANGE
|
||||||
|
0.0 (degC) - offset for Tmax
|
||||||
|
0.0 (degC) - offset for Tmin
|
||||||
|
1.0 (degC) - multiplier for PRCP
|
||||||
|
1.0 (degC) - multiplier for VPD
|
||||||
|
1.0 (degC) - multiplier for RAD
|
||||||
|
|
||||||
|
CO2_CONTROL
|
||||||
|
0 (flag) 0=constant; 1=vary with file
|
||||||
|
395.0 (ppm) constant atmospheric CO2 concentration
|
||||||
|
CO2_from2013.txt (filename) name of the CO2 file
|
||||||
|
|
||||||
|
NDEP_CONTROL
|
||||||
|
0 (flag) 0=constant; 1=vary with file
|
||||||
|
0.001400 (kgN/m2/yr) wet+dry atmospheric deposition of N
|
||||||
|
Ndep_from2013.txt (filename) name of the N-dep file
|
||||||
|
|
||||||
|
SITE
|
||||||
|
30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 (%) sand percentage by volume in rock-free soil
|
||||||
|
50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 (%) silt percentage by volume in rock-free soil
|
||||||
|
7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 (dimless) soil pH
|
||||||
|
248.0 (m) site elevation
|
||||||
|
46.95 (degrees) site latitude (- for S.Hem.)
|
||||||
|
0.20 (DIM) site shortwave albedo
|
||||||
|
9.00 (Celsius) mean annual air temperature
|
||||||
|
10.15 (Celsius) mean annual air temperature range
|
||||||
|
20.00 (mm) maximum height of pond water
|
||||||
|
-9999 (dimless) measured runoff curve number
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (g/cm3) bulk density
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at saturation
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at field capacity
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at wilting point
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at hygroscopic water content
|
||||||
|
|
||||||
|
EPC_FILE
|
||||||
|
maize.epc (filename) EPC file name
|
||||||
|
|
||||||
|
W_STATE
|
||||||
|
0.0 (kg/m2) water stored in snowpack
|
||||||
|
1.0 (DIM) initial soil water as a proportion of field capacity
|
||||||
|
|
||||||
|
CN_STATE
|
||||||
|
0.001 (kgC/m2) first-year maximum leaf carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum fine root carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum fruit carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum softstem carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum live woody stem carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum live coarse root carbon
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) coarse woody debris carbon
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, labile pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, unshielded cellulose pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, shielded cellulose pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, lignin pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, fast microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, medium microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, slow microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, recalcitrant SOM (slowest)
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) litter nitrogen, labile pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) soil mineralized nitrogen, NH4 pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) soil mineralized nitrogen, NO3 pool
|
||||||
|
|
||||||
|
OUTPUT_CONTROL
|
||||||
|
hegyhatsal (filename) output prefix
|
||||||
|
1 (flag) writing daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing monthly average of daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing annual average of daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing annual output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
1 (flag) for on-screen progress indicator
|
||||||
|
|
||||||
|
DAILY_OUTPUT
|
||||||
|
39 number of daily output variables
|
||||||
|
49 1 tsoil[0]
|
||||||
|
171 2 evapotranspiration
|
||||||
|
159 3 soilw_evap
|
||||||
|
397 4 litr1c_total
|
||||||
|
398 5 litr2c_total
|
||||||
|
399 6 litr3c_total
|
||||||
|
400 7 litr4c_total
|
||||||
|
518 8 soil1c_total
|
||||||
|
519 9 soil2c_total
|
||||||
|
520 10 soil3c_total
|
||||||
|
521 11 soil4c_total
|
||||||
|
313 12 fruitc
|
||||||
|
552 13 HRV_transportC
|
||||||
|
2520 14 proj_lai
|
||||||
|
3017 15 total litterfall aboveground
|
||||||
|
3018 16 total litterfall belowground
|
||||||
|
2599 17 vwc[0] soilw layer1 first layer 0-2 cm
|
||||||
|
2600 18 vwc[1] the second 2-5 cm
|
||||||
|
2601 19 vwc[2] the third is at 5-10 cm
|
||||||
|
2602 20 vwc[3] the fourth is at 10-20 cm
|
||||||
|
2603 21 vwc[4] the fifth is at 20-50 cm
|
||||||
|
2604 22 vwc[5] the sixth is at 50-100
|
||||||
|
407 23 standing dead biomass
|
||||||
|
3006 24 daily_npp;
|
||||||
|
3005 25 daily_nep
|
||||||
|
3009 26 daily_gpp
|
||||||
|
3010 27 daily_mr
|
||||||
|
3011 28 daily_gr
|
||||||
|
3012 29 daily_hr
|
||||||
|
3051 30 litrc
|
||||||
|
3052 31 soilc
|
||||||
|
3037 32 cum_yieldC_HRV (kgC/m2)
|
||||||
|
74 33 GDD
|
||||||
|
1531 34 SUM of the soil mineral NH4 in the total soil [kgN/m2]
|
||||||
|
1532 35 SUM of the soil mineral NO3 in the total soil [kgN/m2]
|
||||||
|
3013 36 daily soil respiration
|
||||||
|
307 37 leafC
|
||||||
|
310 38 fine root C
|
||||||
|
316 39 soft stem C
|
||||||
|
|
||||||
|
ANNUAL_OUTPUT
|
||||||
|
12 number of annual output variables
|
||||||
|
0 onday
|
||||||
|
1 offday
|
||||||
|
3000 annprcp
|
||||||
|
3001 anntavg
|
||||||
|
3002 annrunoff
|
||||||
|
2765 ytd_maxplai
|
||||||
|
3024 cum_nee
|
||||||
|
3033 cum_Closs_THN_w
|
||||||
|
3035 cum_Closs_MOW
|
||||||
|
3037 cum_yieldC_HRV
|
||||||
|
3059 NH4_top10
|
||||||
|
3060 NO3_top10
|
||||||
|
|
||||||
|
-------------------
|
||||||
|
MANAGEMENT_SECTION
|
||||||
|
-------------------
|
||||||
|
PLANTING
|
||||||
|
1 (flag) do PLANTING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
121 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) PLANTING day
|
||||||
|
0.05 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) germination depth
|
||||||
|
7 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(n/m2) number of seedlings
|
||||||
|
380 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(g/1000n) weight of 1000-seed
|
||||||
|
40 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) C content of seed
|
||||||
|
100 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) emergence rate
|
||||||
|
|
||||||
|
THINNING
|
||||||
|
0 (flag) do THINNING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) THINNING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) thinning rate of woody plant material
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) thinning rate of non-woody plant material
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of stem
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of leaf
|
||||||
|
|
||||||
|
MOWING
|
||||||
|
0 (flag) do MOWING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
0 (flag) mowing method? 0 - fixday method, 1 - fixvalue method
|
||||||
|
-9999 (m2/m2) fixed value of the LAI before MOWING (fixvalue method)
|
||||||
|
-9999 (m2/m2) fixed value of the LAI after MOWING (fixvalue method)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) MOWING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m2/m2) value of the LAI after MOWING (fixday method)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of plant material
|
||||||
|
|
||||||
|
GRAZING
|
||||||
|
0 (flag) do GRAZING? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) first day of GRAZING
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) last day of GRAZING
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kg/LSU) weight equivalent of one unit
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(LSU/ha) animal stocking rate: Livestock Units per hectare
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kg dry matter/LSU) daily ingested dry matter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) trampling effect (standing dead biome to litter)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) ratio of DM intake formed excrement
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) ratio of excrement returning to litter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) carbon content of dry matter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) N content of manure
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) C content of manure
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN2O-N:kgN) manure emission factor for direct N2O (T10.21)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/1000 kg animal mass/day) default N excretion rate (T10.19)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgCH4/LSU/yr*) manure emission factor for CH4 (T10.14)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgCH4/LSU/yr*) fermentation emission factor for CH4 (T10.11)
|
||||||
|
|
||||||
|
HARVESTING
|
||||||
|
1 (flag) do HARVESTING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
275 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) HARVESTING day
|
||||||
|
0.03 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgC/m2) soft stem C content after HARVESTING
|
||||||
|
90 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of plant material
|
||||||
|
|
||||||
|
PLOUGHING
|
||||||
|
1 (flag) do PLOUGHING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
110 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) PLOUGHING day
|
||||||
|
0.3 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) PLOUGHING depth
|
||||||
|
0.1 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) dissolving coefficient of ploughed biome to litter
|
||||||
|
|
||||||
|
FERTILIZING
|
||||||
|
1 (flag) do FERTILIZING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
90 140 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) FERTILIZING day
|
||||||
|
0.28 0.28 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) fertilizing depth
|
||||||
|
120. 30. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN fertilizer/ha/day) amount of fertilizer
|
||||||
|
100 100 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) dry matter content of fertilizer
|
||||||
|
0.5 0.5 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) nitrate content of fertilizer
|
||||||
|
0.5 0.5 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) ammonium content of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) organic nitrogen content of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgC/kg fertilizer) organic carbon content of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) labile fraction of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) unshielded cellulose fraction of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) shielded cellulose fraction of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) lignin fraction of fertilizer
|
||||||
|
0.01 0.01 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN2O-N:kgN) emission factor for N-additions
|
||||||
|
|
||||||
|
IRRIGATION
|
||||||
|
0 (flag) do IRRIGATION? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) IRRIGATION day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgH2O/m2/day) amount of water
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) utilization coefficient of water
|
||||||
|
|
||||||
|
END_INIT
|
||||||
229
RBBGCMuso/inst/examples/hhs/normal_grass.ini
Normal file
229
RBBGCMuso/inst/examples/hhs/normal_grass.ini
Normal file
@ -0,0 +1,229 @@
|
|||||||
|
BBGC_MuSo simulation (missing data: -9999)
|
||||||
|
|
||||||
|
MET_INPUT
|
||||||
|
hhs_2013-2016.mtc43 (filename) met file name
|
||||||
|
4 (int) number of header lines in met file
|
||||||
|
365 (int) number of simdays in last simyear (truncated year: < 365)
|
||||||
|
|
||||||
|
RESTART
|
||||||
|
1 (flag) 1 = read restart; 0 = dont read restart
|
||||||
|
0 (flag) 1 = write restart; 0 = dont write restart
|
||||||
|
0 (flag) 1 = use restart metyear; 0 = reset metyear
|
||||||
|
hhs.endpoint (filename) name of the input restart file
|
||||||
|
hhs.endpoint (filename) name of the output restart file
|
||||||
|
|
||||||
|
TIME_DEFINE
|
||||||
|
4 (int) number of meteorological data years
|
||||||
|
4 (int) number of simulation years
|
||||||
|
2013 (int) first simulation year
|
||||||
|
0 (flag) 1 = spinup run; 0 = normal run
|
||||||
|
6000 (int) maximum number of spinup years
|
||||||
|
|
||||||
|
CLIM_CHANGE
|
||||||
|
0.0 (degC) - offset for Tmax
|
||||||
|
0.0 (degC) - offset for Tmin
|
||||||
|
1.0 (degC) - multiplier for PRCP
|
||||||
|
1.0 (degC) - multiplier for VPD
|
||||||
|
1.0 (degC) - multiplier for RAD
|
||||||
|
|
||||||
|
CO2_CONTROL
|
||||||
|
0 (flag) 0=constant; 1=vary with file
|
||||||
|
395.0 (ppm) constant atmospheric CO2 concentration
|
||||||
|
CO2_from2013.txt (filename) name of the CO2 file
|
||||||
|
|
||||||
|
NDEP_CONTROL
|
||||||
|
0 (flag) 0=constant; 1=vary with file
|
||||||
|
0.001400 (kgN/m2/yr) wet+dry atmospheric deposition of N
|
||||||
|
Ndep_from2013.txt (filename) name of the N-dep file
|
||||||
|
|
||||||
|
SITE
|
||||||
|
30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 (%) sand percentage by volume in rock-free soil
|
||||||
|
50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 (%) silt percentage by volume in rock-free soil
|
||||||
|
7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 (dimless) soil pH
|
||||||
|
248.0 (m) site elevation
|
||||||
|
46.95 (degrees) site latitude (- for S.Hem.)
|
||||||
|
0.20 (DIM) site shortwave albedo
|
||||||
|
9.00 (Celsius) mean annual air temperature
|
||||||
|
10.15 (Celsius) mean annual air temperature range
|
||||||
|
20.00 (mm) maximum height of pond water
|
||||||
|
-9999 (dimless) measured runoff curve number
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (g/cm3) bulk density
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at saturation
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at field capacity
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at wilting point
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at hygroscopic water content
|
||||||
|
|
||||||
|
EPC_FILE
|
||||||
|
maize.epc (filename) EPC file name
|
||||||
|
|
||||||
|
W_STATE
|
||||||
|
0.0 (kg/m2) water stored in snowpack
|
||||||
|
1.0 (DIM) initial soil water as a proportion of field capacity
|
||||||
|
|
||||||
|
CN_STATE
|
||||||
|
0.001 (kgC/m2) first-year maximum leaf carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum fine root carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum fruit carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum softstem carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum live woody stem carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum live coarse root carbon
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) coarse woody debris carbon
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, labile pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, unshielded cellulose pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, shielded cellulose pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, lignin pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, fast microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, medium microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, slow microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, recalcitrant SOM (slowest)
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) litter nitrogen, labile pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) soil mineralized nitrogen, NH4 pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) soil mineralized nitrogen, NO3 pool
|
||||||
|
|
||||||
|
OUTPUT_CONTROL
|
||||||
|
hegyhatsal (filename) output prefix
|
||||||
|
1 (flag) writing daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing monthly average of daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing annual average of daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing annual output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
1 (flag) for on-screen progress indicator
|
||||||
|
|
||||||
|
DAILY_OUTPUT
|
||||||
|
39 number of daily output variables
|
||||||
|
49 1 tsoil[0]
|
||||||
|
171 2 evapotranspiration
|
||||||
|
159 3 soilw_evap
|
||||||
|
397 4 litr1c_total
|
||||||
|
398 5 litr2c_total
|
||||||
|
399 6 litr3c_total
|
||||||
|
400 7 litr4c_total
|
||||||
|
518 8 soil1c_total
|
||||||
|
519 9 soil2c_total
|
||||||
|
520 10 soil3c_total
|
||||||
|
521 11 soil4c_total
|
||||||
|
313 12 fruitc
|
||||||
|
552 13 HRV_transportC
|
||||||
|
2520 14 proj_lai
|
||||||
|
3017 15 total litterfall aboveground
|
||||||
|
3018 16 total litterfall belowground
|
||||||
|
2599 17 vwc[0] soilw layer1 first layer 0-2 cm
|
||||||
|
2600 18 vwc[1] the second 2-5 cm
|
||||||
|
2601 19 vwc[2] the third is at 5-10 cm
|
||||||
|
2602 20 vwc[3] the fourth is at 10-20 cm
|
||||||
|
2603 21 vwc[4] the fifth is at 20-50 cm
|
||||||
|
2604 22 vwc[5] the sixth is at 50-100
|
||||||
|
407 23 standing dead biomass
|
||||||
|
3006 24 daily_npp
|
||||||
|
3005 25 daily_nep
|
||||||
|
3009 26 daily_gpp
|
||||||
|
3010 27 daily_mr
|
||||||
|
3011 28 daily_gr
|
||||||
|
3012 29 daily_hr
|
||||||
|
3051 30 litrc
|
||||||
|
3052 31 soilc
|
||||||
|
3037 32 cum_yieldC_HRV
|
||||||
|
74 33 GDD
|
||||||
|
1531 34 SUM of the soil mineral NH4 in the total soil [kgN/m2]
|
||||||
|
1532 35 SUM of the soil mineral NO3 in the total soil [kgN/m2]
|
||||||
|
3013 36 daily soil respiration
|
||||||
|
307 37 leafC
|
||||||
|
310 38 fine root C
|
||||||
|
316 39 soft stem C
|
||||||
|
|
||||||
|
ANNUAL_OUTPUT
|
||||||
|
12 number of annual output variables
|
||||||
|
0 onday
|
||||||
|
1 offday
|
||||||
|
3000 annprcp
|
||||||
|
3001 anntavg
|
||||||
|
3002 annrunoff
|
||||||
|
2765 ytd_maxplai
|
||||||
|
3024 cum_nee
|
||||||
|
3033 cum_Closs_THN_w
|
||||||
|
3035 cum_Closs_MOW
|
||||||
|
3037 cum_yieldC_HRV
|
||||||
|
3059 NH4_top10
|
||||||
|
3060 NO3_top10
|
||||||
|
|
||||||
|
-------------------
|
||||||
|
MANAGEMENT_SECTION
|
||||||
|
-------------------
|
||||||
|
PLANTING
|
||||||
|
1 (flag) do PLANTING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
121 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) PLANTING day
|
||||||
|
0.05 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) germination depth
|
||||||
|
7 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(n/m2) number of seedlings
|
||||||
|
380 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(g/1000n) weight of 1000-seed
|
||||||
|
40 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) C content of seed
|
||||||
|
100 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) emergence rate
|
||||||
|
|
||||||
|
THINNING
|
||||||
|
0 (flag) do THINNING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) THINNING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) thinning rate of woody plant material
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) thinning rate of non-woody plant material
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of stem
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of leaf
|
||||||
|
|
||||||
|
MOWING
|
||||||
|
0 (flag) do MOWING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
0 (flag) mowing method? 0 - fixday method, 1 - fixvalue method
|
||||||
|
-9999 (m2/m2) fixed value of the LAI before MOWING (fixvalue method)
|
||||||
|
-9999 (m2/m2) fixed value of the LAI after MOWING (fixvalue method)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) MOWING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m2/m2) value of the LAI after MOWING (fixday method)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of plant material
|
||||||
|
|
||||||
|
GRAZING
|
||||||
|
0 (flag) do GRAZING? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) first day of GRAZING
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) last day of GRAZING
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kg/LSU) weight equivalent of one unit
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(LSU/ha) animal stocking rate: Livestock Units per hectare
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kg dry matter/LSU) daily ingested dry matter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) trampling effect (standing dead biome to litter)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) ratio of DM intake formed excrement
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) ratio of excrement returning to litter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) carbon content of dry matter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) N content of manure
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) C content of manure
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN2O-N:kgN) manure emission factor for direct N2O (T10.21)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/1000 kg animal mass/day) default N excretion rate (T10.19)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgCH4/LSU/yr*) manure emission factor for CH4 (T10.14)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgCH4/LSU/yr*) fermentation emission factor for CH4 (T10.11)
|
||||||
|
|
||||||
|
HARVESTING
|
||||||
|
0 (flag) do HARVESTING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
275 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) HARVESTING day
|
||||||
|
0.03 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgC/m2) soft stem C content after HARVESTING
|
||||||
|
90 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of plant material
|
||||||
|
|
||||||
|
PLOUGHING
|
||||||
|
0 (flag) do PLOUGHING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
110 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) PLOUGHING day
|
||||||
|
0.3 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) PLOUGHING depth
|
||||||
|
0.1 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) dissolving coefficient of ploughed biome to litter
|
||||||
|
|
||||||
|
FERTILIZING
|
||||||
|
0 (flag) do FERTILIZING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
90 140 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) FERTILIZING day
|
||||||
|
0.28 0.28 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) fertilizing depth
|
||||||
|
120. 30. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN fertilizer/ha/day) amount of fertilizer
|
||||||
|
100 100 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) dry matter content of fertilizer
|
||||||
|
0.5 0.5 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) nitrate content of fertilizer
|
||||||
|
0.5 0.5 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) ammonium content of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) organic nitrogen content of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgC/kg fertilizer) organic carbon content of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) labile fraction of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) unshielded cellulose fraction of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) shielded cellulose fraction of fertilizer
|
||||||
|
0. 0. -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) lignin fraction of fertilizer
|
||||||
|
0.01 0.01 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN2O-N:kgN) emission factor for N-additions
|
||||||
|
|
||||||
|
IRRIGATION
|
||||||
|
0 (flag) do IRRIGATION? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) IRRIGATION day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgH2O/m2/day) amount of water
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) utilization coefficient of water
|
||||||
|
|
||||||
|
END_INIT
|
||||||
16
RBBGCMuso/inst/examples/hhs/parameters.csv
Normal file
16
RBBGCMuso/inst/examples/hhs/parameters.csv
Normal file
@ -0,0 +1,16 @@
|
|||||||
|
NAME,INDEX,MIN,MAX
|
||||||
|
BASETEMP,25,3,9
|
||||||
|
WPM,36,0,1
|
||||||
|
EMERGENCE,170.61,0,1000
|
||||||
|
CN_lv,38,10,50
|
||||||
|
CN_li,39,32,70
|
||||||
|
CN_root,40,20,90
|
||||||
|
CN_fruit,41,0,200
|
||||||
|
CN_stem,42,0,200
|
||||||
|
CLEC,55,0.4,0.8
|
||||||
|
FLNR,61,0.05,0.8
|
||||||
|
STOMA,63,0.003,0.015
|
||||||
|
ROOTDEPTH,74,0.3,2.
|
||||||
|
SWCGERMIN,87,0.2,0.9
|
||||||
|
MAXLIFETIME,110,500,1500
|
||||||
|
NH4MOBILEPROP,120,0.05,0.7
|
||||||
|
204
RBBGCMuso/inst/examples/hhs/s.ini
Normal file
204
RBBGCMuso/inst/examples/hhs/s.ini
Normal file
@ -0,0 +1,204 @@
|
|||||||
|
BBGC_MuSo simulation (missing data: -9999)
|
||||||
|
|
||||||
|
MET_INPUT
|
||||||
|
hhs_1961-2014.mtc43 (filename) met file name
|
||||||
|
4 (int) number of header lines in met file
|
||||||
|
365 (int) number of simdays in last simyear (truncated year: < 365)
|
||||||
|
|
||||||
|
RESTART
|
||||||
|
0 (flag) 1 = read restart; 0 = dont read restart
|
||||||
|
1 (flag) 1 = write restart; 0 = dont write restart
|
||||||
|
0 (flag) 1 = use restart metyear; 0 = reset metyear
|
||||||
|
hhs.endpoint (filename) name of the input restart file
|
||||||
|
hhs.endpoint (filename) name of the output restart file
|
||||||
|
|
||||||
|
TIME_DEFINE
|
||||||
|
54 (int) number of meteorological data years
|
||||||
|
54 (int) number of simulation years
|
||||||
|
1961 (int) first simulation year
|
||||||
|
1 (flag) 1 = spinup run; 0 = normal run
|
||||||
|
6000 (int) maximum number of spinup years
|
||||||
|
|
||||||
|
CLIM_CHANGE
|
||||||
|
0.0 (degC) - offset for Tmax
|
||||||
|
0.0 (degC) - offset for Tmin
|
||||||
|
1.0 (degC) - multiplier for PRCP
|
||||||
|
1.0 (degC) - multiplier for VPD
|
||||||
|
1.0 (degC) - multiplier for RAD
|
||||||
|
|
||||||
|
CO2_CONTROL
|
||||||
|
0 (flag) 0=constant; 1=vary with file
|
||||||
|
290.0 (ppm) constant atmospheric CO2 concentration
|
||||||
|
CO2_from1961.txt (filename) name of the CO2 file
|
||||||
|
|
||||||
|
NDEP_CONTROL
|
||||||
|
0 (flag) 0=constant; 1=vary with file
|
||||||
|
0.000200 (kgN/m2/yr) wet+dry atmospheric deposition of N
|
||||||
|
Ndep_from1961.txt (filename) name of the N-dep file
|
||||||
|
|
||||||
|
SITE
|
||||||
|
30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 30.0 (%) sand percentage by volume in rock-free soil
|
||||||
|
50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 50.0 (%) silt percentage by volume in rock-free soil
|
||||||
|
7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 7.0 (dimless) soil pH
|
||||||
|
248.0 (m) site elevation
|
||||||
|
46.95 (degrees) site latitude (- for S.Hem.)
|
||||||
|
0.20 (DIM) site shortwave albedo
|
||||||
|
9.00 (Celsius) mean annual air temperature
|
||||||
|
10.15 (Celsius) mean annual air temperature range
|
||||||
|
20.00 (mm) maximum height of pond water
|
||||||
|
-9999 (dimless) measured runoff curve number
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (g/cm3) bulk density
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at saturation
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at field capacity
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at wilting point
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 (m3/m3) SWC at hygroscopic water content
|
||||||
|
|
||||||
|
EPC_FILE
|
||||||
|
c3grass.epc (filename) EPC file name
|
||||||
|
|
||||||
|
W_STATE
|
||||||
|
0.0 (kg/m2) water stored in snowpack
|
||||||
|
1.0 (DIM) initial soil water as a proportion of field capacity
|
||||||
|
|
||||||
|
CN_STATE
|
||||||
|
0.001 (kgC/m2) first-year maximum leaf carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum fine root carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum fruit carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum softstem carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum live woody stem carbon
|
||||||
|
0.001 (kgC/m2) first-year maximum live coarse root carbon
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) coarse woody debris carbon
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, labile pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, unshielded cellulose pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, shielded cellulose pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) litter carbon, lignin pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, fast microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, medium microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, slow microbial recycling pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgC/m2) soil carbon, recalcitrant SOM (slowest)
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) litter nitrogen, labile pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) soil mineralized nitrogen, NH4 pool
|
||||||
|
0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 (kgN/m2) soil mineralized nitrogen, NO3 pool
|
||||||
|
|
||||||
|
OUTPUT_CONTROL
|
||||||
|
spinup_ (filename) output prefix
|
||||||
|
0 (flag) writing daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing monthly average of daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing annual average of daily output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
0 (flag) writing annual output (0 = no; 1 = binary; 2 = ascii)
|
||||||
|
1 (flag) for on-screen progress indicator
|
||||||
|
|
||||||
|
DAILY_OUTPUT
|
||||||
|
14 number of daily output variables
|
||||||
|
49 tsoil_2cm
|
||||||
|
52 tsoil_20cm
|
||||||
|
2599 vwc_2cm
|
||||||
|
2602 vwc_20cm
|
||||||
|
2751 m_soilstress
|
||||||
|
671 vegc_to_SNSC
|
||||||
|
171 evapotransp
|
||||||
|
2520 proj_LAI
|
||||||
|
407 STDBc_above
|
||||||
|
3004 daily_n2o
|
||||||
|
3008 daily_nbp
|
||||||
|
3009 daily_gpp
|
||||||
|
3014 daily_tr
|
||||||
|
2502 n_actphen
|
||||||
|
|
||||||
|
ANNUAL_OUTPUT
|
||||||
|
12 number of annual output variables
|
||||||
|
0 onday
|
||||||
|
1 offday
|
||||||
|
3000 annprcp
|
||||||
|
3001 anntavg
|
||||||
|
3002 annrunoff
|
||||||
|
2765 ytd_maxplai
|
||||||
|
3024 cum_nee
|
||||||
|
3033 cum_Closs_THN_w
|
||||||
|
3035 cum_Closs_MOW
|
||||||
|
3037 cum_yieldC_HRV
|
||||||
|
3059 NH4_top10
|
||||||
|
3060 NO3_top10
|
||||||
|
|
||||||
|
-------------------
|
||||||
|
MANAGEMENT_SECTION
|
||||||
|
-------------------
|
||||||
|
PLANTING
|
||||||
|
0 (flag) do PLANTING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) PLANTING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) germination depth
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(n/m2) number of seedlings
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(g/1000n) weight of 1000-seed
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) C content of seed
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) emergence rate
|
||||||
|
|
||||||
|
THINNING
|
||||||
|
0 (flag) do THINNING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) THINNING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) thinning rate of woody plant material
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) thinning rate of non-woody plant material
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of stem
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of leaf
|
||||||
|
|
||||||
|
MOWING
|
||||||
|
0 (flag) do MOWING? 0=no; 1=yes; filepath=reading from file
|
||||||
|
0 (flag) mowing method? 0 - fixday method, 1 - fixvalue method
|
||||||
|
-9999 (m2/m2) fixed value of the LAI before MOWING (fixvalue method)
|
||||||
|
-9999 (m2/m2) fixed value of the LAI after MOWING (fixvalue method)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) MOWING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m2/m2) value of the LAI after MOWING (fixday method)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of plant material
|
||||||
|
|
||||||
|
GRAZING
|
||||||
|
0 (flag) do GRAZING? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) first day of GRAZING
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) last day of GRAZING
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kg/LSU) weight equivalent of one unit
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(LSU/ha) animal stocking rate: Livestock Units per hectare
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kg dry matter/LSU) daily ingested dry matter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) trampling effect (standing dead biome to litter)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) ratio of DM intake formed excrement
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) ratio of excrement returning to litter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) carbon content of dry matter
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) N content of manure
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) C content of manure
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN2O-N:kgN) manure emission factor for direct N2O (T10.21)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/1000 kg animal mass/day) default N excretion rate (T10.19)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgCH4/LSU/yr*) manure emission factor for CH4 (T10.14)
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgCH4/LSU/yr*) fermentation emission factor for CH4 (T10.11)
|
||||||
|
|
||||||
|
HARVESTING
|
||||||
|
0 (flag) do HARVESTING? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) HARVESTING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgC/m2) soft stem C content after HARVESTING
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) transported part of plant material
|
||||||
|
|
||||||
|
PLOUGHING
|
||||||
|
0 (flag) do PLOUGHING? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) PLOUGHING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) PLOUGHING depth
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(prop) dissolving coefficient of ploughed biome to litter
|
||||||
|
|
||||||
|
FERTILIZING
|
||||||
|
0 (flag) do FERTILIZING? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) FERTILIZING day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(m) fertilizing depth
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN fertilizer/ha/day) amount of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) dry matter content of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) nitrate content of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) ammonium content of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN/kg fertilizer) organic nitrogen content of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgC/kg fertilizer) organic carbon content of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) labile fraction of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) unshielded cellulose fraction of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) shielded cellulose fraction of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) lignin fraction of fertilizer
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgN2O-N:kgN) emission factor for N-additions
|
||||||
|
|
||||||
|
IRRIGATION
|
||||||
|
0 (flag) do IRRIGATION? 0=no, 1=yes; filepath=reading from file
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(yday) IRRIGATION day
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(kgH2O/m2/day) amount of water
|
||||||
|
-9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 -9999 *(%) utilization coefficient of water
|
||||||
|
|
||||||
|
END_INIT
|
||||||
Loading…
Reference in New Issue
Block a user